RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 STAP1Q9ULZ2 295 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 AP4E1Q9UPM8 1137 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 PCDHB7Q9Y5E2 793 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 COL4A4P53420 1690 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-206ENST00000588860 HHLA1C9JL84 531 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 TMEM189-UBE2V1I3L0A0 370 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 ENPP3O14638 875 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 NDC80O14777 642 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 NRP1O14786 923 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 CAPN9O14815 690 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 TP73O15350 636 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 MYZAPP0CAP1 466 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 COL6A1P12109 1028 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 RARGP13631 454 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 TGM2P21980 687 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 CYP2F1P24903 491 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 L1CAMP32004 1257 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 GATMP50440 423 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 GDF10P55107 478 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 EIF3BP55884 814 aaKnown RBP9.11□□□□□ -0.95
SMAD4-206ENST00000588860 BCAR1P56945 870 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 PITX1P78337 314 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-206ENST00000588860 YWHAHQ04917 246 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-206ENST00000588860 DEUP1Q05D60 604 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 NME3Q13232 169 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 NOMO1Q15155 1222 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 DPYSL2Q16555 572 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 KRT71Q3SY84 523 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 PLEKHG4Q58EX7 1191 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 RAB41Q5JT25 222 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 OTUD1Q5VV17 481 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-206ENST00000588860 KCTD16Q68DU8 428 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 HIBCHQ6NVY1 386 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-206ENST00000588860 DARS2Q6PI48 645 aaKnown RBP9.11□□□□□ -0.95
SMAD4-206ENST00000588860 CEP128Q6ZU80 1094 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 TRMT10CQ7L0Y3 403 aaKnown RBP9.11□□□□□ -0.95
SMAD4-206ENST00000588860 HOOK3Q86VS8 718 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 FAM131BQ86XD5 332 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 VSIG1Q86XK7 387 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 SPATA2LQ8IUW3 424 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-206ENST00000588860 UNC45BQ8IWX7 931 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 SH2D3CQ8N5H7 860 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 PQLC3Q8N755 202 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 PLD5Q8N7P1 536 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 DBF4BQ8NFT6 615 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 PCDH19Q8TAB3 1148 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 UHMK1Q8TAS1 419 aaKnown RBP9.11□□□□□ -0.95
SMAD4-206ENST00000588860 SLC7A14Q8TBB6 771 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 P3H4Q92791 437 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 EXOC4Q96A65 974 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 FAF2Q96CS3 445 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 FAM122AQ96E09 287 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 ATP6V1G3Q96LB4 118 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 NPY6RQ99463 290 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 ZNF670Q9BS34 389 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 TSPYL1Q9H0U9 437 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 SEMA4AQ9H3S1 761 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 ELAC1Q9H777 363 aaKnown RBP9.11□□□□□ -0.95
SMAD4-206ENST00000588860 POPDC2Q9HBU9 364 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 DMAP1Q9NPF5 467 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-206ENST00000588860 AAASQ9NRG9 546 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 CALCOCO1Q9P1Z2 691 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 BCCIPQ9P287 314 aaKnown RBP eCLIP9.11□□□□□ -0.95
SMAD4-206ENST00000588860 DNAJB4Q9UDY4 337 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 RAPGEFL1Q9UHV5 662 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 OGDHLQ9ULD0 1010 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 TPX2Q9ULW0 747 aaKnown RBP9.11□□□□□ -0.95
SMAD4-206ENST00000588860 FZD10Q9ULW2 581 aa9.11□□□□□ -0.95
SMAD4-206ENST00000588860 PRG3Q9Y2Y8 225 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-206ENST00000588860 SPTBN5Q9NRC6 3674 aaKnown RBP9.11□□□□□ -0.95
SMAD4-206ENST00000588860 YJEFN3A6XGL0 299 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 ZNF487B1APH4 448 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 HMGB1P1B2RPK0 211 aaPredicted RBP9.1□□□□□ -0.95
SMAD4-206ENST00000588860 E7ENQ6 273 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 H3BRJ5 948 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 M0QYT0 321 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 RIPK2O43353 540 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 TADA2AO75478 443 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 ZBED1O96006 694 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 LTFP02788 710 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 SHBGP04278 402 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 NUDT17P0C025 328 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 RBP3P10745 1247 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 ZFXP17010 805 aaPredicted RBP9.1□□□□□ -0.95
SMAD4-206ENST00000588860 IL4RP24394 825 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 GPNMBQ14956 572 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 SKIDA1Q1XH10 827 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 TCTN1Q2MV58 587 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 SLC39A12Q504Y0 691 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 DNAJC21Q5F1R6 531 aaKnown RBP9.1□□□□□ -0.95
SMAD4-206ENST00000588860 UBAP2Q5T6F2 1119 aaKnown RBP9.1□□□□□ -0.95
SMAD4-206ENST00000588860 AGBL2Q5U5Z8 902 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 SYPL2Q5VXT5 272 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 SLC9A4Q6AI14 798 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 C4orf50Q6ZRC1 276 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 B4GALNT4Q76KP1 1039 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 LRRTM3Q86VH5 581 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 ZC3H18Q86VM9 953 aaKnown RBP9.1□□□□□ -0.95
SMAD4-206ENST00000588860 CDKL3Q8IVW4 592 aaPredicted RBP9.1□□□□□ -0.95
SMAD4-206ENST00000588860 ZCCHC9Q8N567 271 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms