RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.18■■□□□ 1.3
ATG4D-209ENST00000588857 MDM4O15151 490 aa23.17■■□□□ 1.3
ATG4D-209ENST00000588857 RALAP11233 206 aa23.17■■□□□ 1.3
ATG4D-209ENST00000588857 KDELR1P24390 212 aa23.17■■□□□ 1.3
ATG4D-209ENST00000588857 KRT81Q14533 505 aa23.17■■□□□ 1.3
ATG4D-209ENST00000588857 LLGL1Q15334 1064 aa23.17■■□□□ 1.3
ATG4D-209ENST00000588857 TFDP3Q5H9I0 405 aa23.17■■□□□ 1.3
ATG4D-209ENST00000588857 TEX35Q5T0J7 233 aa23.17■■□□□ 1.3
ATG4D-209ENST00000588857 MFSD7Q6UXD7 560 aa23.17■■□□□ 1.3
ATG4D-209ENST00000588857 CCDC149Q6ZUS6 474 aa23.17■■□□□ 1.3
ATG4D-209ENST00000588857 TAC4Q86UU9 113 aa23.17■■□□□ 1.3
ATG4D-209ENST00000588857 MAP7D3Q8IWC1 876 aa23.17■■□□□ 1.3
ATG4D-209ENST00000588857 PDZD8Q8NEN9 1154 aa23.17■■□□□ 1.3
ATG4D-209ENST00000588857 MAIP1Q8WWC4 291 aa23.17■■□□□ 1.3
ATG4D-209ENST00000588857 SNRNP25Q9BV90 132 aaKnown RBP23.17■■□□□ 1.3
ATG4D-209ENST00000588857 RBM12Q9NTZ6 932 aaKnown RBP23.17■■□□□ 1.3
ATG4D-209ENST00000588857 H3BNC9 293 aa23.16■■□□□ 1.3
ATG4D-209ENST00000588857 FSCN2O14926 492 aa23.16■■□□□ 1.3
ATG4D-209ENST00000588857 GLUD1P00367 558 aa23.16■■□□□ 1.3
ATG4D-209ENST00000588857 PDK2Q15119 407 aa23.16■■□□□ 1.3
ATG4D-209ENST00000588857 PDE12Q6L8Q7 609 aaKnown RBP23.16■■□□□ 1.3
ATG4D-209ENST00000588857 LILRA6Q6PI73 481 aa23.16■■□□□ 1.3
ATG4D-209ENST00000588857 HEMGNQ9BXL5 484 aa23.16■■□□□ 1.3
ATG4D-209ENST00000588857 SMOC2Q9H3U7 446 aa23.16■■□□□ 1.3
ATG4D-209ENST00000588857 CERS4Q9HA82 394 aa23.16■■□□□ 1.3
ATG4D-209ENST00000588857 OSER1Q9NX31 292 aa23.16■■□□□ 1.3
ATG4D-209ENST00000588857 CCDC188H7C350 402 aa23.15■■□□□ 1.3
ATG4D-209ENST00000588857 RARGP13631 454 aa23.15■■□□□ 1.3
ATG4D-209ENST00000588857 PTPN7P35236 360 aa23.15■■□□□ 1.3
ATG4D-209ENST00000588857 GTF2F1P35269 517 aaKnown RBP eCLIP23.15■■□□□ 1.3
ATG4D-209ENST00000588857 CDKN2BP42772 138 aa23.15■■□□□ 1.3
ATG4D-209ENST00000588857 CDH6P55285 790 aa23.15■■□□□ 1.3
ATG4D-209ENST00000588857 ADGRE1Q14246 886 aa23.15■■□□□ 1.3
ATG4D-209ENST00000588857 PPP2R5EQ16537 467 aa23.15■■□□□ 1.3
ATG4D-209ENST00000588857 ITIH5Q86UX2 942 aa23.15■■□□□ 1.3
ATG4D-209ENST00000588857 PSTKQ8IV42 348 aaKnown RBP23.15■■□□□ 1.3
ATG4D-209ENST00000588857 CCDC185Q8N715 623 aa23.15■■□□□ 1.3
ATG4D-209ENST00000588857 NOA1Q8NC60 698 aaKnown RBP23.15■■□□□ 1.3
ATG4D-209ENST00000588857 OVCA2Q8WZ82 227 aa23.15■■□□□ 1.3
ATG4D-209ENST00000588857 RNF34Q969K3 372 aa23.15■■□□□ 1.3
ATG4D-209ENST00000588857 MYRFLQ96LU7 910 aa23.15■■□□□ 1.3
ATG4D-209ENST00000588857 ZNF512Q96ME7 567 aaPredicted RBP23.15■■□□□ 1.3
ATG4D-209ENST00000588857 CALN1Q9BXU9 219 aa23.15■■□□□ 1.3
ATG4D-209ENST00000588857 OLA1Q9NTK5 396 aaKnown RBP23.15■■□□□ 1.3
ATG4D-209ENST00000588857 TMEM51Q9NW97 253 aa23.15■■□□□ 1.3
ATG4D-209ENST00000588857 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.15■■□□□ 1.3
ATG4D-209ENST00000588857 FBXW11Q9UKB1 542 aa23.15■■□□□ 1.3
ATG4D-209ENST00000588857 AP4E1Q9UPM8 1137 aa23.15■■□□□ 1.3
ATG4D-209ENST00000588857 V9GYY5 206 aaPredicted RBP23.15■■□□□ 1.3
ATG4D-209ENST00000588857 UQCRHLA0A096LP55 91 aa23.14■■□□□ 1.3
ATG4D-209ENST00000588857 C3orf70A6NLC5 250 aaPredicted RBP23.14■■□□□ 1.3
ATG4D-209ENST00000588857 CTIFO43310 598 aaKnown RBP23.14■■□□□ 1.3
ATG4D-209ENST00000588857 TJP3O95049 919 aa23.14■■□□□ 1.3
ATG4D-209ENST00000588857 UQCRHP07919 91 aa23.14■■□□□ 1.3
ATG4D-209ENST00000588857 AIF1P55008 147 aa23.14■■□□□ 1.3
ATG4D-209ENST00000588857 ARL13BQ3SXY8 428 aa23.14■■□□□ 1.3
ATG4D-209ENST00000588857 ZC3H12AQ5D1E8 599 aaKnown RBP23.14■■□□□ 1.3
ATG4D-209ENST00000588857 KAZNQ674X7 775 aa23.14■■□□□ 1.3
ATG4D-209ENST00000588857 KREMEN2Q8NCW0 462 aa23.14■■□□□ 1.3
ATG4D-209ENST00000588857 TRMT2BQ96GJ1 504 aaKnown RBP23.14■■□□□ 1.3
ATG4D-209ENST00000588857 DHX35Q9H5Z1 703 aaKnown RBP23.14■■□□□ 1.3
ATG4D-209ENST00000588857 WDCPQ9H6R7 721 aa23.14■■□□□ 1.3
ATG4D-209ENST00000588857 GPATCH2LQ9NWQ4 482 aa23.14■■□□□ 1.3
ATG4D-209ENST00000588857 NUDT5Q9UKK9 219 aa23.14■■□□□ 1.3
ATG4D-209ENST00000588857 CHD7Q9P2D1 2997 aa23.14■■□□□ 1.3
ATG4D-209ENST00000588857 IGLV3-25P01717 112 aa23.14■■□□□ 1.29
ATG4D-209ENST00000588857 LRG1P02750 347 aa23.14■■□□□ 1.29
ATG4D-209ENST00000588857 ZDHHC11BP0C7U3 371 aa23.14■■□□□ 1.29
ATG4D-209ENST00000588857 HMGA1P17096 107 aaKnown RBP23.14■■□□□ 1.29
ATG4D-209ENST00000588857 IRS1P35568 1242 aa23.14■■□□□ 1.29
ATG4D-209ENST00000588857 CXCR3P49682 368 aa23.14■■□□□ 1.29
ATG4D-209ENST00000588857 CAMK1Q14012 370 aa23.14■■□□□ 1.29
ATG4D-209ENST00000588857 MSANTD2Q6P1R3 559 aa23.14■■□□□ 1.29
ATG4D-209ENST00000588857 DNAJB7Q7Z6W7 309 aaPredicted RBP23.14■■□□□ 1.29
ATG4D-209ENST00000588857 MMGT1Q8N4V1 131 aa23.14■■□□□ 1.29
ATG4D-209ENST00000588857 MAFAQ8NHW3 353 aaPredicted RBP23.14■■□□□ 1.29
ATG4D-209ENST00000588857 ARNTL2Q8WYA1 636 aa23.14■■□□□ 1.29
ATG4D-209ENST00000588857 CASP10Q92851 521 aa23.14■■□□□ 1.29
ATG4D-209ENST00000588857 SERPINB11Q96P15 392 aa23.14■■□□□ 1.29
ATG4D-209ENST00000588857 WDR6Q9NNW5 1121 aaKnown RBP23.14■■□□□ 1.29
ATG4D-209ENST00000588857 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.14■■□□□ 1.29
ATG4D-209ENST00000588857 UXTQ9UBK9 157 aaPredicted RBP23.14■■□□□ 1.29
ATG4D-209ENST00000588857 SFMBT1Q9UHJ3 866 aa23.14■■□□□ 1.29
ATG4D-209ENST00000588857 FZD10Q9ULW2 581 aa23.14■■□□□ 1.29
ATG4D-209ENST00000588857 EFR3BQ9Y2G0 817 aa23.14■■□□□ 1.29
ATG4D-209ENST00000588857 ASB3Q9Y575 518 aa23.14■■□□□ 1.29
ATG4D-209ENST00000588857 MYO7AQ13402 2215 aa23.13■■□□□ 1.29
ATG4D-209ENST00000588857 hCG_1818297A0A087WSY0 165 aa23.13■■□□□ 1.29
ATG4D-209ENST00000588857 TCRBV7S2A1N4TA0A589 114 aa23.13■■□□□ 1.29
ATG4D-209ENST00000588857 CD48P09326 243 aa23.13■■□□□ 1.29
ATG4D-209ENST00000588857 KRT10P13645 584 aa23.13■■□□□ 1.29
ATG4D-209ENST00000588857 PPP6R3Q5H9R7 873 aaPredicted RBP23.13■■□□□ 1.29
ATG4D-209ENST00000588857 EFHC2Q5JST6 749 aa23.13■■□□□ 1.29
ATG4D-209ENST00000588857 CCDC70Q6NSX1 233 aa23.13■■□□□ 1.29
ATG4D-209ENST00000588857 ANKS1BQ7Z6G8 1248 aa23.13■■□□□ 1.29
ATG4D-209ENST00000588857 PSMG2Q969U7 264 aa23.13■■□□□ 1.29
ATG4D-209ENST00000588857 NTAN1Q96AB6 310 aa23.13■■□□□ 1.29
ATG4D-209ENST00000588857 CDK5RAP1Q96SZ6 601 aaKnown RBP23.13■■□□□ 1.29
ATG4D-209ENST00000588857 MAK16Q9BXY0 300 aaKnown RBP23.13■■□□□ 1.29
ATG4D-209ENST00000588857 TRPM5Q9NZQ8 1165 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms