RNA–Protein interactions for RNA: ENST00000588066.5

NEDD4L-221, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-221ENST00000588066 RTP3Q9BQQ7 232 aa9.13□□□□□ -0.95
NEDD4L-221ENST00000588066 TMEM121Q9BTD3 319 aa9.13□□□□□ -0.95
NEDD4L-221ENST00000588066 TMEM106CQ9BVX2 250 aa9.13□□□□□ -0.95
NEDD4L-221ENST00000588066 BRD8Q9H0E9 1235 aa9.13□□□□□ -0.95
NEDD4L-221ENST00000588066 FBXO44Q9H4M3 255 aa9.13□□□□□ -0.95
NEDD4L-221ENST00000588066 NRDE2Q9H7Z3 1164 aa9.13□□□□□ -0.95
NEDD4L-221ENST00000588066 ABCC13Q9NSE7 274 aa9.13□□□□□ -0.95
NEDD4L-221ENST00000588066 CACNG4Q9UBN1 327 aa9.13□□□□□ -0.95
NEDD4L-221ENST00000588066 ADAM21Q9UKJ8 722 aa9.13□□□□□ -0.95
NEDD4L-221ENST00000588066 ADAM28Q9UKQ2 775 aa9.13□□□□□ -0.95
NEDD4L-221ENST00000588066 FZD10Q9ULW2 581 aa9.13□□□□□ -0.95
NEDD4L-221ENST00000588066 PRG3Q9Y2Y8 225 aaPredicted RBP9.13□□□□□ -0.95
NEDD4L-221ENST00000588066 PCDHB5Q9Y5E4 795 aa9.13□□□□□ -0.95
NEDD4L-221ENST00000588066 HHLA1C9JL84 531 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 H0YGN5 161 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 EEF2KO00418 725 aaKnown RBP9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 NCAM2O15394 837 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 RIPK2O43353 540 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 TPD52L2O43399 206 aaKnown RBP9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 EFCAB14O75071 495 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 RTN3O95197 1032 aaPredicted RBP9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 TTC4O95801 387 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 ABHD2P08910 425 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 USP17L7P0C7H9 530 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 TSHRP16473 764 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 PHBP35232 272 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 ADRA1BP35368 520 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 NDUFV1P49821 464 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 ATN1P54259 1190 aaPredicted RBP9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 RPL10AP62906 217 aaKnown RBP9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 ZNF844Q08AG5 666 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 SCAPQ12770 1279 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 MMRN1Q13201 1228 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 NME3Q13232 169 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 IKBKEQ14164 716 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 STAT4Q14765 748 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 BRMS1LQ5PSV4 323 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 VARS2Q5ST30 1063 aaKnown RBP9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 FAM171A1Q5VUB5 890 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 BSPRYQ5W0U4 402 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 CNKSR3Q6P9H4 555 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 C1orf228Q6PIY5 440 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 ANKS3Q6ZW76 656 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 BNIPLQ7Z465 357 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 SCN4BQ8IWT1 228 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 OR10T2Q8NGX3 314 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 PCDH19Q8TAB3 1148 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 SPPL2BQ8TCT7 592 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 HASPINQ8TF76 798 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 RNF139Q8WU17 664 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 RNF34Q969K3 372 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 PGM2Q96G03 612 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 CEP295NLQ96MC4 621 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 CASD1Q96PB1 797 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 CSPG4P5Q96PW8 444 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 KCTD15Q96SI1 283 aaPredicted RBP9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 RBM15Q96T37 977 aaKnown RBP eCLIP9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 KCNK16Q96T55 309 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 EPAS1Q99814 870 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 FAM118BQ9BPY3 351 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 KLC2Q9H0B6 622 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 CRISPLD2Q9H0B8 497 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 CENPHQ9H3R5 247 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 GPATCH2LQ9NWQ4 482 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 DDIT4Q9NX09 232 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 FBXW11Q9UKB1 542 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 HEY1Q9Y5J3 304 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 NFS1Q9Y697 457 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 USP3Q9Y6I4 520 aa9.12□□□□□ -0.95
NEDD4L-221ENST00000588066 A0A087WUV0 522 aaPredicted RBP9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 YJEFN3A6XGL0 299 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 TBKBP1A7MCY6 615 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 E7ENQ6 273 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 NRP1O14786 923 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 RASGRF2O14827 1237 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 PPP1R12AO14974 1030 aaPredicted RBP9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 CHADO15335 359 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 RGS16O15492 202 aaPredicted RBP9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 MTSS1O43312 755 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 AGTP01019 485 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 SLC2A3P11169 496 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 PECAM1P16284 738 aaPredicted RBP9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 MX2P20592 715 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 FGFR3P22607 806 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 IL4RP24394 825 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 SERPINB6P35237 376 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 RPL22P35268 128 aaKnown RBP9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 MAGEA4P43358 317 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 CXCR3P49682 368 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 CTCFP49711 727 aaPredicted RBP9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 YWHAGP61981 247 aaKnown RBP eCLIP9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 SARNPP82979 210 aaKnown RBP9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 SKOR1P84550 965 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 TLE2Q04725 743 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 SLC29A2Q14542 456 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 PDK1Q15118 436 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 MTFR1Q15390 333 aa9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 PKN2Q16513 984 aaKnown RBP9.11□□□□□ -0.95
NEDD4L-221ENST00000588066 CA9Q16790 459 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms