RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	NCR1	O76036	304 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	PPP3CB	P16298	524 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	THBS4	P35443	961 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	PSMC2	P35998	433 aa	Known RBP	6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	PGM1	P36871	562 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	DGKQ	P52824	942 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	RBM6	P78332	1123 aa	Known RBP	6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	FAM189B	P81408	668 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	GALNT2	Q10471	571 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	REST	Q13127	1097 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	RRP1B	Q14684	758 aa	Known RBP	6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	AAK1	Q2M2I8	961 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	HAUS3	Q68CZ6	603 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	GLB1L	Q6UWU2	654 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	FASTKD5	Q7L8L6	764 aa	Known RBP	6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	CAND1	Q86VP6	1230 aa	Known RBP	6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	RAB11FIP4	Q86YS3	637 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	LRRC56	Q8IYG6	542 aa	Predicted RBP	6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	FSIP1	Q8NA03	581 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	LINS1	Q8NG48	757 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	SOCS4	Q8WXH5	440 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	RSPRY1	Q96DX4	576 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	TREX2	Q9BQ50	279 aa	Predicted RBP	6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	SERHL2	Q9H4I8	314 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	PRDM13	Q9H4Q3	707 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	ZNF768	Q9H5H4	540 aa	Known RBP	6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	NRDE2	Q9H7Z3	1164 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	KCNK9	Q9NPC2	374 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	AKIP1	Q9NQ31	210 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	ORC3	Q9UBD5	711 aa	Predicted RBP	6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	POLG2	Q9UHN1	485 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	HSF4	Q9ULV5	492 aa		6.1	□□□□□ -1.43
TUBD1-208	ENST00000588009	PSMD9	O00233	223 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	SPTLC2	O15270	562 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	SLC16A3	O15427	465 aa	Known RBP	6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	ZNF623	O75123	536 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	TMEM63A	O94886	807 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	HEXIM1	O94992	359 aa	Known RBP	6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	CFP	P27918	469 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	ABCD3	P28288	659 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	CCT4	P50991	539 aa	Known RBP	6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	CLNS1A	P54105	237 aa	Known RBP	6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	NAP1L1	P55209	391 aa	Known RBP	6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	FAM3B	P58499	235 aa	Predicted RBP	6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	CRHR2	Q13324	411 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	BFSP2	Q13515	415 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	TST	Q16762	297 aa	Known RBP	6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	ST3GAL2	Q16842	350 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	LRRC24	Q50LG9	513 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	RABL3	Q5HYI8	236 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	ANKRD40	Q6AI12	368 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	GRHL2	Q6ISB3	625 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	SYNE3	Q6ZMZ3	975 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	BRINP3	Q76B58	766 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	LRRC8D	Q7L1W4	858 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	FEZF2	Q8TBJ5	459 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009		Q8TCH9	128 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	SLC2A12	Q8TD20	617 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	ADAMTS15	Q8TE58	950 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	TBC1D22A	Q8WUA7	517 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	ERP27	Q96DN0	273 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	RBM17	Q96I25	401 aa	Known RBP	6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	DPCD	Q9BVM2	203 aa	Predicted RBP	6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	SSBP3	Q9BWW4	388 aa	Predicted RBP	6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	RCE1	Q9Y256	329 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	CNPY2	Q9Y2B0	182 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	UBE2J1	Q9Y385	318 aa	Predicted RBP	6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009	PCDHA10	Q9Y5I2	948 aa		6.09	□□□□□ -1.43
TUBD1-208	ENST00000588009		A8MVJ9	347 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	NKX2-8	O15522	239 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	HNRNPR	O43390	633 aa	Known RBP	6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	ZBED4	O75132	1171 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	CSF1	P09603	554 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	RPL15	P61313	204 aa	Known RBP	6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	RNASEL	Q05823	741 aa	Known RBP	6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	GPR68	Q15743	365 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	CBWD5	Q5RIA9	395 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	NAA35	Q5VZE5	725 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	TTLL5	Q6EMB2	1281 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	ARMC6	Q6NXE6	501 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	MAVS	Q7Z434	540 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	CHD1L	Q86WJ1	897 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	ARMC8	Q8IUR7	673 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	GALNT4	Q8N4A0	578 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	ANKRD44	Q8N8A2	993 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	B3GALNT2	Q8NCR0	500 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	LPIN2	Q92539	896 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	NPIPB3	Q92617	1050 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	WDYHV1	Q96HA8	205 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	VPS50	Q96JG6	964 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	FAR2	Q96K12	515 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	PIGS	Q96S52	555 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	IL21R	Q9HBE5	538 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	RAPGEFL1	Q9UHV5	662 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	RAB21	Q9UL25	225 aa		6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	TRPC5	Q9UL62	973 aa	Predicted RBP	6.08	□□□□□ -1.44
TUBD1-208	ENST00000588009	FSD2	A1L4K1	749 aa		6.07	□□□□□ -1.44
TUBD1-208	ENST00000588009	AGAP5	A6NIR3	686 aa		6.07	□□□□□ -1.44
TUBD1-208	ENST00000588009	MBD3L5	A6NJ08	208 aa	Predicted RBP	6.07	□□□□□ -1.44
TUBD1-208	ENST00000588009	ZNF500	O60304	480 aa	Predicted RBP	6.07	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms