RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 SALL4Q9UJQ4 1053 aa10.78□□□□□ -0.68
CLPTM1-207ENST00000587537 ZNF510Q9Y2H8 683 aa10.78□□□□□ -0.68
CLPTM1-207ENST00000587537 CAPN6Q9Y6Q1 641 aa10.78□□□□□ -0.68
CLPTM1-207ENST00000587537 PRRC2BQ5JSZ5 2229 aaKnown RBP10.77□□□□□ -0.68
CLPTM1-207ENST00000587537 LRCH4O75427 683 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 RFPL2O75678 378 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 MYL4P12829 197 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 TCF3P15923 654 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 TCP1P17987 556 aaKnown RBP10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 COMTP21964 271 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 IGFBP4P22692 258 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 CXCR3P49682 368 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 COPS2P61201 443 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 SCAPQ12770 1279 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 EIF4EBP2Q13542 120 aaPredicted RBP10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 RPS6KA1Q15418 735 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 TAF5Q15542 800 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 HABP4Q5JVS0 413 aaKnown RBP10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 PRSS36Q5K4E3 855 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 MEI1Q5TIA1 1274 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 CC2D1AQ6P1N0 951 aaPredicted RBP10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 HFE2Q6ZVN8 426 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 GAREM2Q75VX8 874 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 NT5DC3Q86UY8 548 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 DNAAF5Q86Y56 855 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 E2F7Q96AV8 911 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 HES6Q96HZ4 224 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 RBM41Q96IZ5 413 aaKnown RBP10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 CFAP57Q96MR6 1250 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 NAPGQ99747 312 aaPredicted RBP10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 DDX50Q9BQ39 737 aaKnown RBP10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 CARD9Q9H257 536 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 WDCPQ9H6R7 721 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 WDR6Q9NNW5 1121 aaKnown RBP10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 RCOR3Q9P2K3 495 aaPredicted RBP10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 DNMT3BQ9UBC3 853 aaKnown RBP10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 RNF14Q9UBS8 474 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 TRIM10Q9UDY6 481 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 USP18Q9UMW8 372 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 NAALADL1Q9UQQ1 740 aa10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 MRPS23Q9Y3D9 190 aaKnown RBP10.77□□□□□ -0.69
CLPTM1-207ENST00000587537 SOX1O00570 391 aaPredicted RBP10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 TADA3O75528 432 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 GLP2RO95838 553 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 ABL1P00519 1130 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 IGLV3-27P01718 113 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 HDCP19113 662 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 CASQ1P31415 396 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 AVPR1AP37288 418 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 HARS2P49590 506 aaKnown RBP10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 CDR1P51861 262 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 HDAC4P56524 1084 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 RWDD2BP57060 319 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 TBX4P57082 545 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 ATP11AP98196 1134 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 OGDHQ02218 1023 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 NRG1Q02297 640 aaPredicted RBP10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 ZNF252P-AS1Q0IIN9 211 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 PDK2Q15119 407 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 PUS10Q3MIT2 529 aaKnown RBP10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 EFHC2Q5JST6 749 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 RARS2Q5T160 578 aaKnown RBP10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 ERMARDQ5T6L9 678 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 SYPL2Q5VXT5 272 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 PHLDB2Q86SQ0 1253 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 TMEM150AQ86TG1 271 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 TAC4Q86UU9 113 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 KATNAL2Q8IYT4 538 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 ATP6V0D2Q8N8Y2 350 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 KIF18AQ8NI77 898 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 EDEM1Q92611 657 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 CD101Q93033 1021 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 RNF34Q969K3 372 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 PBKQ96KB5 322 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 BTN2A3PQ96KV6 586 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 C1orf74Q96LT6 269 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 C16orf45Q96MC5 204 aaPredicted RBP10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 HAPLN3Q96S86 360 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 NAP1L3Q99457 506 aaPredicted RBP10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 ZNF334Q9HCZ1 680 aaPredicted RBP10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 OSER1Q9NX31 292 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 CLDND1Q9NY35 253 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 OBP2AQ9NY56 170 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 LSM7Q9UK45 103 aaKnown RBP10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 ARHGAP26Q9UNA1 814 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 TFR2Q9UP52 801 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 FAM50BQ9Y247 325 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 EFR3BQ9Y2G0 817 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 PCDHA3Q9Y5H8 950 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 NUP210Q8TEM1 1887 aaPredicted RBP10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 HELZP42694 1942 aaKnown RBP10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 LAMA3Q16787 3333 aa10.76□□□□□ -0.69
CLPTM1-207ENST00000587537 A0A1W2PRU2 124 aa10.75□□□□□ -0.69
CLPTM1-207ENST00000587537 COCHO43405 550 aa10.75□□□□□ -0.69
CLPTM1-207ENST00000587537 ZNF189O75820 626 aaPredicted RBP10.75□□□□□ -0.69
CLPTM1-207ENST00000587537 CKMP06732 381 aa10.75□□□□□ -0.69
CLPTM1-207ENST00000587537 FOSL2P15408 326 aa10.75□□□□□ -0.69
CLPTM1-207ENST00000587537 FSHRP23945 695 aa10.75□□□□□ -0.69
CLPTM1-207ENST00000587537 MIPP30301 263 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms