RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 ENDOD1O94919 500 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 TRUB2O95900 331 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 DESP17661 470 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 PSMA2P25787 234 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 SULT1E1P49888 294 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 PITX1P78337 314 aaPredicted RBP17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 EFEMP1Q12805 493 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 RNF10Q8N5U6 811 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 ARL14EPQ8N8R7 260 aaPredicted RBP17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 ADAM33Q9BZ11 813 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 SLITRK6Q9H5Y7 841 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 KCND1Q9NSA2 647 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 CDH7Q9ULB5 785 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 ZFP37Q9Y6Q3 630 aaPredicted RBP17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 MDM4O15151 490 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 IRAK2O43187 625 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 CCP110O43303 1012 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 F9P00740 461 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 CKMP06732 381 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 TFE3P19532 575 aaPredicted RBP17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 MAN1A1P33908 653 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 AVPR1AP37288 418 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 NOP2P46087 812 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 KPNA1P52294 538 aaPredicted RBP17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 PIGHQ14442 188 aaPredicted RBP17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 IFI16Q16666 785 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 ARHGAP29Q52LW3 1261 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 POTEHQ6S545 545 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 REXO1L1PQ8IX06 675 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 ZFRQ96KR1 1074 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 TBCBQ99426 244 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 FAM204AQ9H8W3 233 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 DDIT4Q9NX09 232 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 SFMBT1Q9UHJ3 866 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 RASAL2Q9UJF2 1139 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 ARHGAP26Q9UNA1 814 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 TLR6Q9Y2C9 796 aa17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 HBS1LQ9Y450 684 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-203ENST00000586486 M0QYT0 321 aa17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 PROSCO94903 275 aa17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 IGLV3-27P01718 113 aa17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 MBL2P11226 248 aaPredicted RBP17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 GBP1P32455 592 aa17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 RDXP35241 583 aaKnown RBP17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 RING1Q06587 406 aa17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 TRIP4Q15650 581 aaPredicted RBP17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 C15orf59Q2T9L4 293 aaPredicted RBP17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 PUS10Q3MIT2 529 aaKnown RBP17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 C11orf63Q6NUN7 778 aa17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 CCAR2Q8N163 923 aaKnown RBP17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 TPCN2Q8NHX9 752 aa17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 ADAM32Q8TC27 787 aa17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 FAM172AQ8WUF8 416 aa17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 BTBD6Q96KE9 485 aa17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 ZSWIM3Q96MP5 696 aa17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 CYP2S1Q96SQ9 504 aa17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 NCAPGQ9BPX3 1015 aa17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 LZTFL1Q9NQ48 299 aa17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 CALCOCO1Q9P1Z2 691 aa17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 USTQ9Y2C2 406 aa17.68■□□□□ 0.42
PRKCSH-203ENST00000586486 MACROD2A1Z1Q3 448 aa17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 GOLGA6L9A6NEM1 432 aa17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 MSI1O43347 362 aaKnown RBP17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 TCF3P15923 654 aa17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 HDAC4P56524 1084 aa17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 COG7P83436 770 aa17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 ATP11AP98196 1134 aa17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 SMAD2Q15796 467 aaKnown RBP17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 MIB1Q86YT6 1006 aa17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 ZSCAN18Q8TBC5 510 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 KIAA1524Q8TCG1 905 aa17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 SLC39A13Q96H72 371 aa17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 KLF16Q9BXK1 252 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 TRPV4Q9HBA0 871 aa17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 PIGVQ9NUD9 493 aa17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 GUCA1BQ9UMX6 200 aa17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 ZKSCAN5Q9Y2L8 839 aa17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 CPQQ9Y646 472 aa17.67■□□□□ 0.42
PRKCSH-203ENST00000586486 BUB1O43683 1085 aa17.66■□□□□ 0.42
PRKCSH-203ENST00000586486 BUB1BO60566 1050 aaPredicted RBP17.66■□□□□ 0.42
PRKCSH-203ENST00000586486 DEUP1Q05D60 604 aa17.66■□□□□ 0.42
PRKCSH-203ENST00000586486 CDO1Q16878 200 aa17.66■□□□□ 0.42
PRKCSH-203ENST00000586486 SH3PXD2AQ5TCZ1 1133 aa17.66■□□□□ 0.42
PRKCSH-203ENST00000586486 OTOP3Q7RTS5 596 aa17.66■□□□□ 0.42
PRKCSH-203ENST00000586486 DDX42Q86XP3 938 aaKnown RBP eCLIP17.66■□□□□ 0.42
PRKCSH-203ENST00000586486 SMARCD2Q92925 531 aa17.66■□□□□ 0.42
PRKCSH-203ENST00000586486 PLD4Q96BZ4 506 aa17.66■□□□□ 0.42
PRKCSH-203ENST00000586486 ASB16Q96NS5 453 aa17.66■□□□□ 0.42
PRKCSH-203ENST00000586486 MYADMQ96S97 322 aa17.66■□□□□ 0.42
PRKCSH-203ENST00000586486 KIF9Q9HAQ2 790 aa17.66■□□□□ 0.42
PRKCSH-203ENST00000586486 TDP1Q9NUW8 608 aa17.66■□□□□ 0.42
PRKCSH-203ENST00000586486 FAM50BQ9Y247 325 aa17.66■□□□□ 0.42
PRKCSH-203ENST00000586486 PAXBP1Q9Y5B6 917 aa17.66■□□□□ 0.42
PRKCSH-203ENST00000586486 SLC12A8A0AV02 714 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 LRCH4O75427 683 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 RNF8O76064 485 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 PRAMEF12O95522 483 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 PCK1P35558 622 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 CXCR3P49682 368 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms