RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 NDUFA10O95299 355 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 TRUB2O95900 331 aaKnown RBP15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 F9P00740 461 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 TMEM253P0C7T8 217 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 IRF1P10914 325 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 SLC2A3P11169 496 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 PDGFRAP16234 1089 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 PSMC3P17980 439 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 GPD1P21695 349 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 HARS2P49590 506 aaKnown RBP15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 SULT1E1P49888 294 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 TBX4P57082 545 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 MAMLD1Q13495 774 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 MTF1Q14872 753 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 TRIP4Q15650 581 aaPredicted RBP15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 SLC25A52Q3SY17 297 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 SYPL2Q5VXT5 272 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 NUGGCQ68CJ6 796 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 TAC4Q86UU9 113 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 UNC45BQ8IWX7 931 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 GJD3Q8N144 294 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 ADAMTS19Q8TE59 1207 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 RNF34Q969K3 372 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 MCEEQ96PE7 176 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 DDX23Q9BUQ8 820 aaKnown RBP15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 TRMT61BQ9BVS5 477 aaKnown RBP15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 KLF16Q9BXK1 252 aaPredicted RBP15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 THAP2Q9H0W7 228 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 DDIT4Q9NX09 232 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 TBC1D14Q9P2M4 693 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 CCL26Q9Y258 94 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 TLR6Q9Y2C9 796 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 ZNF510Q9Y2H8 683 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 COL6A3P12111 3177 aa15.21■□□□□ 0.03
SCAMP4-209ENST00000585335 HELZP42694 1942 aaKnown RBP15.21■□□□□ 0.02
SCAMP4-209ENST00000585335 C2CD4BA6NLJ0 364 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 M0QYT0 321 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 ZNF263O14978 683 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 LCA5LO95447 670 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 APOEP02649 317 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 CYP1A2P05177 515 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 HMBSP08397 361 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 FLT3P36888 993 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 MAGEA1P43355 309 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 PTPN9P43378 593 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 IFNAR2P48551 515 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 KRT83P78385 493 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 RING1Q06587 406 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 CCDC173Q0VFZ6 552 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 MTA1Q13330 715 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 TDGQ13569 410 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 ZNF77Q15935 545 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 ARHGAP29Q52LW3 1261 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 POTEHQ6S545 545 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 VITQ6UXI7 678 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 RXFP2Q8WXD0 754 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 KHSRPQ92945 711 aaKnown RBP eCLIP15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 ZFRQ96KR1 1074 aaKnown RBP15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 NPY6RQ99463 290 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 GKN1Q9NS71 199 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 UVRAGQ9P2Y5 699 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 SLC12A6Q9UHW9 1150 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 LCMT1Q9UIC8 334 aa15.2■□□□□ 0.02
SCAMP4-209ENST00000585335 SYNJ2BP-COX16A0A087WUM0 186 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 TCRBV5S1A1TA0A578 114 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 ARHGAP6O43182 974 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 IRAK2O43187 625 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 MSI1O43347 362 aaKnown RBP15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 STC2O76061 302 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 ASGR2P07307 311 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 RFC1P35251 1148 aaPredicted RBP15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 ZNF143P52747 638 aaPredicted RBP15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 DEUP1Q05D60 604 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 FCHO2Q0JRZ9 810 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 NME3Q13232 169 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 GRM2Q14416 872 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 PDGFRLQ15198 375 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 PPP1R15BQ5SWA1 713 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 DNAAF5Q86Y56 855 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 TMEM139Q8IV31 216 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 LRRC8AQ8IWT6 810 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 RHOT2Q8IXI1 618 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 EMC1Q8N766 993 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 ST13P5Q8NFI4 369 aaPredicted RBP15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 JOSD2Q8TAC2 188 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 ADAM32Q8TC27 787 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 RSAD2Q8WXG1 361 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 OTUB2Q96DC9 234 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 PDLIM2Q96JY6 352 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 CFAP57Q96MR6 1250 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 UHRF1Q96T88 793 aaPredicted RBP15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 NCAPGQ9BPX3 1015 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 NUP85Q9BW27 656 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 BRD9Q9H8M2 597 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 DUS2Q9NX74 493 aaKnown RBP15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 COX16Q9P0S2 106 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 CTTNBP2NLQ9P2B4 639 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 SORCS3Q9UPU3 1222 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 PCDHA13Q9Y5I0 950 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms