RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 ETFBP38117 255 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 RPL10AP62906 217 aaKnown RBP11.69□□□□□ -0.54
TOP3A-217ENST00000584582 KLF1Q13351 362 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-217ENST00000584582 NLRP9Q7RTR0 991 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 TFAP2DQ7Z6R9 452 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 TRABD2AQ86V40 505 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 B3GALNT2Q8NCR0 500 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 PCDH19Q8TAB3 1148 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 CKAP2Q8WWK9 683 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 ATXN2LQ8WWM7 1075 aaKnown RBP11.69□□□□□ -0.54
TOP3A-217ENST00000584582 TSPYL2Q9H2G4 693 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-217ENST00000584582 PRDM12Q9H4Q4 367 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 WDCPQ9H6R7 721 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 NRDE2Q9H7Z3 1164 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 IPPQ9Y573 584 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 CDY2AQ9Y6F7 541 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 RNF103O00237 685 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 C2CD2LO14523 706 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 SNRPAP09012 282 aaKnown RBP11.68□□□□□ -0.54
TOP3A-217ENST00000584582 ERVK-10P10266 1014 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 ELNP15502 786 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 AFF1P51825 1210 aaKnown RBP11.68□□□□□ -0.54
TOP3A-217ENST00000584582 WDR4P57081 412 aaKnown RBP11.68□□□□□ -0.54
TOP3A-217ENST00000584582 GHRHRQ02643 423 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 STILQ15468 1287 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 TAF1BQ53T94 588 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-217ENST00000584582 C6orf163Q5TEZ5 329 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 LRRC38Q5VT99 294 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 BTBD8Q5XKL5 378 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 IQSEC1Q6DN90 963 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 TRMT10BQ6PF06 316 aaKnown RBP11.68□□□□□ -0.54
TOP3A-217ENST00000584582 C12orf50Q8NA57 414 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-217ENST00000584582 ZNF75CPQ92670 426 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-217ENST00000584582 STAMBPL1Q96FJ0 436 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 MAGEB18Q96M61 343 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 SYT15Q9BQS2 421 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 BFARQ9NZS9 450 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 ST3GAL5Q9UNP4 418 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 ARFGEF1Q9Y6D6 1849 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 C2CD4BA6NLJ0 364 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 LGR5O75473 907 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 PSMB4P28070 264 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 CD52P31358 61 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 EFHC1Q5JVL4 640 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 CDCA2Q69YH5 1023 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-217ENST00000584582 LCLAT1Q6UWP7 414 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 PRPF39Q86UA1 669 aaKnown RBP11.68□□□□□ -0.54
TOP3A-217ENST00000584582 IGDCC3Q8IVU1 814 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 FUKQ8N0W3 1084 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 ARFGAP1Q8N6T3 406 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 PDCD6IPQ8WUM4 868 aaKnown RBP11.68□□□□□ -0.54
TOP3A-217ENST00000584582 ZNF395Q9H8N7 513 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-217ENST00000584582 FBXO6Q9NRD1 293 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-217ENST00000584582 C2CD2Q9Y426 696 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 NRCAMQ92823 1304 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 NDC80O14777 642 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 CHUKO15111 745 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 CFLARO15519 480 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 PTPN1P18031 435 aaKnown RBP11.68□□□□□ -0.54
TOP3A-217ENST00000584582 IGFBP6P24592 240 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-217ENST00000584582 GMPRP36959 345 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 GRM5P41594 1212 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.68□□□□□ -0.54
TOP3A-217ENST00000584582 POLNQ7Z5Q5 900 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 SDCCAG8Q86SQ7 713 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-217ENST00000584582 CRLF3Q8IUI8 442 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 SEC14L1Q92503 715 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 LTBP3Q9NS15 1303 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 TXLNGQ9NUQ3 528 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 PCDHGC3Q9UN70 934 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 USH1CQ9Y6N9 552 aa11.68□□□□□ -0.54
TOP3A-217ENST00000584582 MYBPHLA2RUH7 354 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 ALOX15BO15296 676 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 MYL2P10916 166 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 KLRC2P26717 231 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 RASSF2P50749 326 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 SLC25A11Q02978 314 aaKnown RBP11.67□□□□□ -0.54
TOP3A-217ENST00000584582 KYAT1Q16773 422 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 SYPL2Q5VXT5 272 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 LONP2Q86WA8 852 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 OR6P1Q8NGX9 317 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 SPON2Q9BUD6 331 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 MYLK2Q9H1R3 596 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 LHX5Q9H2C1 402 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 ADAM7Q9H2U9 754 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 POLR2AP24928 1970 aaKnown RBP11.67□□□□□ -0.54
TOP3A-217ENST00000584582 SPTLC1O15269 473 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 ZBTB48P10074 688 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-217ENST00000584582 CYP3A5P20815 502 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 CLCNKBP51801 687 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 LRRC36Q1X8D7 754 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 HFE2Q6ZVN8 426 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 TP53INP2Q8IXH6 220 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 MPP5Q8N3R9 675 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 FITM2Q8N6M3 262 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 HTR3CQ8WXA8 447 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 UPF1Q92900 1129 aaKnown RBP eCLIP11.67□□□□□ -0.545e-9■■■■■ 39.4
TOP3A-217ENST00000584582 SRPK1Q96SB4 655 aaKnown RBP11.67□□□□□ -0.54
TOP3A-217ENST00000584582 FSD1LQ9BXM9 530 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 NOD2Q9HC29 1040 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms