RNA–Protein interactions for RNA: ENST00000584243.5

GGA3-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-218ENST00000584243 FTH1P19P0C7X4 201 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 MYF5P13349 255 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 POLR2BP30876 1174 aaKnown RBP8.46□□□□□ -1.06
GGA3-218ENST00000584243 LSP1P33241 339 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 PTPN7P35236 360 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 PMS2P54278 862 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 ACTR2P61160 394 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 PPP2R2AP63151 447 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 PRKCEQ02156 737 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 PRPF4BQ13523 1007 aaKnown RBP8.46□□□□□ -1.06
GGA3-218ENST00000584243 LAMC2Q13753 1193 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 TFDP1Q14186 410 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 EMC2Q15006 297 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 DRICH1Q6PGQ1 229 aaPredicted RBP8.46□□□□□ -1.06
GGA3-218ENST00000584243 SV2AQ7L0J3 742 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 SLC13A5Q86YT5 568 aaPredicted RBP8.46□□□□□ -1.06
GGA3-218ENST00000584243 WDR49Q8IV35 697 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 CCDC50Q8IVM0 306 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 ZBTB8OSQ8IWT0 167 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 RHOT1Q8IXI2 618 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 GBP7Q8N8V2 638 aaPredicted RBP8.46□□□□□ -1.06
GGA3-218ENST00000584243 HELQQ8TDG4 1101 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 UBLCP1Q8WVY7 318 aaPredicted RBP8.46□□□□□ -1.06
GGA3-218ENST00000584243 PSPC1Q8WXF1 523 aaKnown RBP8.46□□□□□ -1.06
GGA3-218ENST00000584243 MAGOHBQ96A72 148 aaKnown RBP8.46□□□□□ -1.06
GGA3-218ENST00000584243 TTC25Q96NG3 672 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 TAAR1Q96RJ0 339 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 NUP85Q9BW27 656 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 TRAIPQ9BWF2 469 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 DDX47Q9H0S4 455 aaKnown RBP8.46□□□□□ -1.06
GGA3-218ENST00000584243 TUT1Q9H6E5 874 aaKnown RBP8.46□□□□□ -1.06
GGA3-218ENST00000584243 DHX33Q9H6R0 707 aaKnown RBP8.46□□□□□ -1.06
GGA3-218ENST00000584243 AZI2Q9H6S1 392 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 ZNF302Q9NR11 478 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 PARVAQ9NVD7 372 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 COL20A1Q9P218 1284 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 SEPT9Q9UHD8 586 aaPredicted RBP8.46□□□□□ -1.06
GGA3-218ENST00000584243 AMACRQ9UHK6 382 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 EFR3BQ9Y2G0 817 aa8.46□□□□□ -1.06
GGA3-218ENST00000584243 ANKHD1Q8IWZ3 2542 aaKnown RBP8.46□□□□□ -1.06
GGA3-218ENST00000584243 NIPBLQ6KC79 2804 aaeCLIP8.45□□□□□ -1.06
GGA3-218ENST00000584243 GOLGA4Q13439 2230 aaKnown RBP8.45□□□□□ -1.06
GGA3-218ENST00000584243 IGKV6D-21A0A0A0MT36 114 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 C9IYK1 514 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 K7ERI5 159 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 DCLK1O15075 740 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 TTI1O43156 1089 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 MED7O43513 233 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 CCNE2O96020 404 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 KRT14P02533 472 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 CNPP09543 421 aaKnown RBP8.45□□□□□ -1.06
GGA3-218ENST00000584243 P4HA1P13674 534 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 COMTP21964 271 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 ECHS1P30084 290 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 PIK3CAP42336 1068 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 PEX5P50542 639 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 GUCY2FP51841 1108 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 SNX16P57768 344 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 FMO1Q01740 532 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 POU5F1BQ06416 359 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 DHX9Q08211 1270 aaKnown RBP8.45□□□□□ -1.06
GGA3-218ENST00000584243 ZNF844Q08AG5 666 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 KRT71Q3SY84 523 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 TTMPQ5BVD1 217 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 GKAP1Q5VSY0 366 aaPredicted RBP8.45□□□□□ -1.06
GGA3-218ENST00000584243 IER5Q5VY09 327 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 CCDC137Q6PK04 289 aaKnown RBP8.45□□□□□ -1.06
GGA3-218ENST00000584243 PHF13Q86YI8 300 aaPredicted RBP8.45□□□□□ -1.06
GGA3-218ENST00000584243 KATNAL2Q8IYT4 538 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 TSEN2Q8NCE0 465 aaKnown RBP8.45□□□□□ -1.06
GGA3-218ENST00000584243 EXD1Q8NHP7 514 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 IL31RAQ8NI17 732 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 SNF8Q96H20 258 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 CAMK1GQ96NX5 476 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 CGRRF1Q99675 332 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 TACO1Q9BSH4 297 aaKnown RBP8.45□□□□□ -1.06
GGA3-218ENST00000584243 AP1M1Q9BXS5 423 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 MRPL4Q9BYD3 311 aaKnown RBP8.45□□□□□ -1.06
GGA3-218ENST00000584243 NFKBIZQ9BYH8 718 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 TXLNGYQ9BZA5 131 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 POLR3FQ9H1D9 316 aaPredicted RBP8.45□□□□□ -1.06
GGA3-218ENST00000584243 CCDC134Q9H6E4 229 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 OSGEPQ9NPF4 335 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 DDX56Q9NY93 547 aaKnown RBP8.45□□□□□ -1.06
GGA3-218ENST00000584243 SENP1Q9P0U3 644 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 WDR35Q9P2L0 1181 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 CNOT8Q9UFF9 292 aaKnown RBP8.45□□□□□ -1.06
GGA3-218ENST00000584243 IP6K2Q9UHH9 426 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 RSPH14Q9UHP6 348 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 AGO2Q9UKV8 859 aaKnown RBP8.45□□□□□ -1.06
GGA3-218ENST00000584243 PACSIN2Q9UNF0 486 aaPredicted RBP8.45□□□□□ -1.06
GGA3-218ENST00000584243 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.45□□□□□ -1.06
GGA3-218ENST00000584243 ACTL7BQ9Y614 415 aa8.45□□□□□ -1.06
GGA3-218ENST00000584243 GMNCA6NCL1 334 aa8.44□□□□□ -1.06
GGA3-218ENST00000584243 RGS16O15492 202 aaPredicted RBP8.44□□□□□ -1.06
GGA3-218ENST00000584243 DAPK3O43293 454 aa8.44□□□□□ -1.06
GGA3-218ENST00000584243 TOM1L1O75674 476 aa8.44□□□□□ -1.06
GGA3-218ENST00000584243 PROSCO94903 275 aa8.44□□□□□ -1.06
GGA3-218ENST00000584243 TJP3O95049 919 aa8.44□□□□□ -1.06
GGA3-218ENST00000584243 IL18RAPO95256 599 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms