RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 ATP2A2P16615 1042 aaKnown RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 PCSK1P29120 753 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 CYP2C18P33260 490 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 GMPRP36959 345 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 PTPN9P43378 593 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 ACADSBP45954 432 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 SLC11A1P49279 550 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 DGKGP49619 791 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 ZBED6P86452 979 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 ID3Q02535 119 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 SOX4Q06945 474 aaPredicted RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 PPP3CAQ08209 521 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 MYO1EQ12965 1108 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 ADAM9Q13443 819 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 CUL2Q13617 745 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 ENPP2Q13822 863 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 NFE2Q16621 373 aaPredicted RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 USP41Q3LFD5 358 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 HSF5Q4G112 596 aaPredicted RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 LRRC38Q5VT99 294 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 CDCP2Q5VXM1 449 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 AFMIDQ63HM1 303 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 CDPF1Q6NVV7 123 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 GBP6Q6ZN66 633 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 ZNF365Q70YC5 407 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 IRF2BP2Q7Z5L9 587 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 SLFN11Q7Z7L1 901 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 CPXM2Q8N436 756 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 LRRC71Q8N4P6 559 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 FIBCD1Q8N539 461 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 CCDC112Q8NEF3 446 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 DTX3LQ8TDB6 740 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 BCL7CQ8WUZ0 217 aaPredicted RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 NELL1Q92832 810 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 DNASE1L2Q92874 299 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 FAF2Q96CS3 445 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 OTUB2Q96DC9 234 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 LMLNQ96KR4 655 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 ELOVL4Q9GZR5 314 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 INTS2Q9H0H0 1204 aaKnown RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 NSUN3Q9H649 340 aaKnown RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 SFXN1Q9H9B4 322 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 CRIM1Q9NZV1 1036 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 WDR35Q9P2L0 1181 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 FBXO10Q9UK96 956 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 TTC7AQ9ULT0 858 aaPredicted RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 NAP1L2Q9ULW6 460 aaPredicted RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 ZNF510Q9Y2H8 683 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 GDAQ9Y2T3 454 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 GPR55Q9Y2T6 319 aaPredicted RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 NME7Q9Y5B8 376 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 SHROOM3Q8TF72 1996 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 IGLV3-10A0A075B6K4 115 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 TMEM150BA6NC51 233 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 NPC1O15118 1278 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 OIP5O43482 229 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 ECI2O75521 394 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 RTN3O95197 1032 aaPredicted RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 KCNH1O95259 989 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 NFICP08651 508 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 IMPDH2P12268 514 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 IBSPP21815 317 aaPredicted RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 ID4P47928 161 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 GLUD2P49448 558 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 RAD23BP54727 409 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 GSDMDP57764 484 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 SNX16P57768 344 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 SMAD4Q13485 552 aaKnown RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 KIZQ2M2Z5 673 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 SOWAHAQ2M3V2 549 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 PLEKHG6Q3KR16 790 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 ZC2HC1CQ53FD0 456 aaPredicted RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 MPP7Q5T2T1 576 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 KCNT2Q6UVM3 1135 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 TOGARAM2Q6ZUX3 1019 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 BMP8AQ7Z5Y6 402 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 ZNF227Q86WZ6 799 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 DDX42Q86XP3 938 aaKnown RBP eCLIP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 THNSL2Q86YJ6 484 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 DCP1BQ8IZD4 617 aaKnown RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 ZNF557Q8N988 423 aaPredicted RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 SLC4A11Q8NBS3 891 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 SLC7A14Q8TBB6 771 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 COG1Q8WTW3 980 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 SLC35F5Q8WV83 523 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 NTAN1Q96AB6 310 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 KLHL5Q96PQ7 755 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 MIPEPQ99797 713 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 APOBEC3GQ9HC16 384 aaKnown RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 MIOSQ9NXC5 875 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 GCNT4Q9P109 453 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 UXTQ9UBK9 157 aaPredicted RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 NDOR1Q9UHB4 597 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 MSRAQ9UJ68 235 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 PIN4Q9Y237 131 aaKnown RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 MRPS23Q9Y3D9 190 aaKnown RBP3.2□□□□□ -1.9
CCDC178-213ENST00000583930 PCDHB12Q9Y5F1 795 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 MTCH2Q9Y6C9 303 aa3.2□□□□□ -1.9
CCDC178-213ENST00000583930 MYLKQ15746 1914 aa3.19□□□□□ -1.9
CCDC178-213ENST00000583930 KRBA1A5PL33 1030 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms