RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 PGAP3Q96FM1 320 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ALS2CR12Q96Q35 445 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TBCBQ99426 244 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ADAM33Q9BZ11 813 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 GOLPH3Q9H4A6 298 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 NUDT5Q9UKK9 219 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 FAM50BQ9Y247 325 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TRIOO75962 3097 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 DOCK6Q96HP0 2047 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 M0QYT0 321 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ZNF500O60304 480 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 MOSPD3O75425 235 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TBX18O95935 607 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 HOXB8P17481 243 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CDC25CP30307 473 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SULT1E1P49888 294 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TUBP50607 506 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ETF1P62495 437 aaKnown RBP17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ATP11AP98196 1134 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 EIF4EBP2Q13542 120 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 OTUD1Q5VV17 481 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TMC5Q6UXY8 1006 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 STRADAQ7RTN6 431 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 GRASPQ7Z6J2 395 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 NT5DC3Q86UY8 548 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 DQX1Q8TE96 717 aaKnown RBP17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 FAM172AQ8WUF8 416 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 UBE2Q2Q8WVN8 375 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SMG7Q92540 1137 aaKnown RBP17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CDK5RAP1Q96SZ6 601 aaKnown RBP17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 NCAPGQ9BPX3 1015 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CCSER2Q9H7U1 834 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 PIDD1Q9HB75 910 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 OLA1Q9NTK5 396 aaKnown RBP17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CLEC1BQ9P126 229 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CALCOCO1Q9P1Z2 691 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 AMFRQ9UKV5 643 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 USTQ9Y2C2 406 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 HYOU1Q9Y4L1 999 aa17.05■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ZNF318Q5VUA4 2279 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 NRG2O14511 850 aaPredicted RBP17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TLR5O60602 858 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 RNF8O76064 485 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TRUB2O95900 331 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 F9P00740 461 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 IGLV3-25P01717 112 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TUBB4AP04350 444 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 DESP17661 470 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 GBP1P32455 592 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 PCK1P35558 622 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CCR2P41597 374 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 HDAC4P56524 1084 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CLUL1Q15846 466 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CDO1Q16878 200 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 RAB6CQ53S08 254 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 PRSS36Q5K4E3 855 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 RARS2Q5T160 578 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 MEI1Q5TIA1 1274 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 KLHDC10Q6PID8 442 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 PDZD4Q76G19 769 aaPredicted RBP17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 RSRC2Q7L4I2 434 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 GPR149Q86SP6 731 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TADA2BQ86TJ2 420 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 WDR24Q96S15 920 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 RAB6CQ9H0N0 254 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ATXN3LQ9H3M9 355 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SMOC2Q9H3U7 446 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TMEM51Q9NW97 253 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SFMBT1Q9UHJ3 866 aa17.04■□□□□ 0.32
CDK5RAP3-228ENST00000583363 MYO16Q9Y6X6 1858 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 NOTCH4Q99466 2003 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ZNF197O14709 1029 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 MBTPS2O43462 519 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 LRCH4O75427 683 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 FTCDO95954 541 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 OAS1P00973 400 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 MIPP30301 263 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ATP5C1P36542 298 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TAS2R40P59535 323 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 NTHL1P78549 312 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 EFEMP1Q12805 493 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SMAD2Q15796 467 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 C10orf120Q5SQS8 335 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 DAB2IPQ5VWQ8 1189 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 PEX26Q7Z412 305 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TAC4Q86UU9 113 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SHKBP1Q8TBC3 707 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ADAM32Q8TC27 787 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 MRPS31Q92665 395 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CD101Q93033 1021 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TCEAL4Q96EI5 215 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 GCNAQ96QF7 691 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 RNF38Q9H0F5 515 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 S1PR5Q9H228 398 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 DNMT3LQ9UJW3 386 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 JRKLQ9Y4A0 524 aa17.03■□□□□ 0.32
CDK5RAP3-228ENST00000583363 A0A1W2PRU2 124 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 C2orf78A6NCI8 922 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SOBPA7XYQ1 873 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 MDM4O15151 490 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms