RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ERGIC2Q96RQ1 377 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 CPXM1Q96SM3 734 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 CBX8Q9HC52 389 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 TJP2Q9UDY2 1190 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 ZNF510Q9Y2H8 683 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 HBS1LQ9Y450 684 aaKnown RBP13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 DAAM1Q9Y4D1 1078 aa13.17□□□□□ -0.3
SMARCE1-218ENST00000582955 FAM170AA1A519 330 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 NEDD8-MDP1E9PL57 170 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 HOXC11O43248 304 aaPredicted RBP13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 MSI1O43347 362 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 RNF40O75150 1001 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 KLKB1P03952 638 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 SP9P0CG40 484 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 SOX5P35711 763 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 STAT1P42224 750 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 CXCL12P48061 93 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 SLC6A11P48066 632 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 HARS2P49590 506 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 CCR3P51677 355 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 SATB1Q01826 763 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 KDSRQ06136 332 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 PPP2R5DQ14738 602 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 MSANTD2Q6P1R3 559 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 TSSK4Q6SA08 328 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 NOP9Q86U38 636 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 LUZP1Q86V48 1076 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 C12orf40Q86WS4 652 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 MAML2Q8IZL2 1156 aaPredicted RBP13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 SPEM1Q8N4L4 309 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 TMEM35BQ8NCS4 154 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 EPS8L1Q8TE68 723 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 BHMTQ93088 406 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 PNKPQ96T60 521 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 TRIM62Q9BVG3 475 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 BBS2Q9BXC9 721 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 RTN4Q9NQC3 1192 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 FBXO4Q9UKT5 387 aa13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 AGO1Q9UL18 857 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-218ENST00000582955 GOLGA6L19H0YKK7 550 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 TEX33O43247 280 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 SERPINC1P01008 464 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 APODP05090 189 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 MMEP08473 750 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 CHKAP35790 457 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 EIF2DP41214 584 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 CLCN6P51797 869 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 SEC13P55735 322 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 JAM2P57087 298 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 SNX16P57768 344 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 TRIP4Q15650 581 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 FBXO43Q4G163 708 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 PTPN20Q4JDL3 420 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 OR6B2Q6IFH4 312 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 FAM183BPQ6ZVS7 135 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 CACNA2D4Q7Z3S7 1137 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 EZH1Q92800 747 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 PIWIL1Q96J94 861 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 XPO6Q96QU8 1125 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 PHOX2BQ99453 314 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 POPDC2Q9HBU9 364 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 PRMT8Q9NR22 394 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 ARHGEF4Q9NR80 690 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 WDR35Q9P2L0 1181 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 DEC1Q9P2X7 70 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 NAALADL1Q9UQQ1 740 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 MYOFQ9NZM1 2061 aa13.15□□□□□ -0.3
SMARCE1-218ENST00000582955 CACNA1IQ9P0X4 2223 aa13.15□□□□□ -0.31
SMARCE1-218ENST00000582955 CACNA1HO95180 2353 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 ATG13O75143 517 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 KAT7O95251 611 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 CAVIN2O95810 425 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 ERBB2P04626 1255 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 FYNP06241 537 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 TYRP14679 529 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 TBX4P57082 545 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 YWHAZP63104 245 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 ARID5AQ03989 594 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 PREPLQ4J6C6 727 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 EFHC1Q5JVL4 640 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 PKN3Q6P5Z2 889 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 TOGARAM2Q6ZUX3 1019 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 ZNF677Q86XU0 584 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 RPLP0P6Q8NHW5 317 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 ADAM32Q8TC27 787 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 DQX1Q8TE96 717 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 SLC20A1Q8WUM9 679 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 DDX1Q92499 740 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 SERPINB11Q96P15 392 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 DNAJC17Q9NVM6 304 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 PLK2Q9NYY3 685 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 MARK1Q9P0L2 795 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 R4GN57 208 aa13.14□□□□□ -0.31
SMARCE1-218ENST00000582955 TBC1D3BA6NDS4 549 aa13.13□□□□□ -0.31
SMARCE1-218ENST00000582955 TULP3O75386 442 aa13.13□□□□□ -0.31
SMARCE1-218ENST00000582955 GRAP2O75791 330 aa13.13□□□□□ -0.31
SMARCE1-218ENST00000582955 LSM8O95777 96 aaKnown RBP13.13□□□□□ -0.31
SMARCE1-218ENST00000582955 CYBBP04839 570 aa13.13□□□□□ -0.31
SMARCE1-218ENST00000582955 CDH5P33151 784 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms