RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 C1orf53Q5VUE5 145 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 FAM43BQ6ZT52 329 aaPredicted RBP11.63□□□□□ -0.55
GGA3-213ENST00000582486 TMEM173Q86WV6 379 aaPredicted RBP11.63□□□□□ -0.55
GGA3-213ENST00000582486 SCN4BQ8IWT1 228 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 IRGQQ8WZA9 623 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 PGLYRP2Q96PD5 576 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 FAM204AQ9H8W3 233 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 WDR6Q9NNW5 1121 aaKnown RBP11.63□□□□□ -0.55
GGA3-213ENST00000582486 ADAM21Q9UKJ8 722 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 TBX21Q9UL17 535 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 TPX2Q9ULW0 747 aaKnown RBP11.63□□□□□ -0.55
GGA3-213ENST00000582486 TANC1Q9C0D5 1861 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 H7C0C1 242 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 TNFRSF10BO14763 440 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 SHBGP04278 402 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 AMPD1P23109 780 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 ATP5OP48047 213 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 MRPL58Q14197 206 aaKnown RBP11.63□□□□□ -0.55
GGA3-213ENST00000582486 KCTD16Q68DU8 428 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 FUT10Q6P4F1 479 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 PSTKQ8IV42 348 aaKnown RBP11.63□□□□□ -0.55
GGA3-213ENST00000582486 STKLD1Q8NE28 680 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 LRRN4Q8WUT4 740 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 MRPL9Q9BYD2 267 aaKnown RBP11.63□□□□□ -0.55
GGA3-213ENST00000582486 LRRC4CQ9HCJ2 640 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 ANLNQ9NQW6 1124 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 TMEM39AQ9NV64 488 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 ETNK2Q9NVF9 386 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 DDIT4Q9NX09 232 aa11.63□□□□□ -0.55
GGA3-213ENST00000582486 GOLGA6CA6NDK9 693 aa11.62□□□□□ -0.55
GGA3-213ENST00000582486 RIPK2O43353 540 aa11.62□□□□□ -0.55
GGA3-213ENST00000582486 GOLGA6DP0CG33 693 aa11.62□□□□□ -0.55
GGA3-213ENST00000582486 FGFR3P22607 806 aa11.62□□□□□ -0.55
GGA3-213ENST00000582486 RPL22P35268 128 aaKnown RBP11.62□□□□□ -0.55
GGA3-213ENST00000582486 ARL4AP40617 200 aa11.62□□□□□ -0.55
GGA3-213ENST00000582486 GPR15P49685 360 aa11.62□□□□□ -0.55
GGA3-213ENST00000582486 GBE1Q04446 702 aa11.62□□□□□ -0.55
GGA3-213ENST00000582486 SLC10A2Q12908 348 aaPredicted RBP11.62□□□□□ -0.55
GGA3-213ENST00000582486 NFE2Q16621 373 aaPredicted RBP11.62□□□□□ -0.55
GGA3-213ENST00000582486 DDR2Q16832 855 aa11.62□□□□□ -0.55
GGA3-213ENST00000582486 SDHAF4Q5VUM1 108 aa11.62□□□□□ -0.55
GGA3-213ENST00000582486 DENND2CQ68D51 928 aa11.62□□□□□ -0.55
GGA3-213ENST00000582486 SCML4Q8N228 414 aa11.62□□□□□ -0.55
GGA3-213ENST00000582486 UHMK1Q8TAS1 419 aaKnown RBP11.62□□□□□ -0.55
GGA3-213ENST00000582486 VWCEQ96DN2 955 aa11.62□□□□□ -0.55
GGA3-213ENST00000582486 PGAP3Q96FM1 320 aaPredicted RBP11.62□□□□□ -0.55
GGA3-213ENST00000582486 TSPYL1Q9H0U9 437 aa11.62□□□□□ -0.55
GGA3-213ENST00000582486 CDC42EP4Q9H3Q1 356 aaKnown RBP11.62□□□□□ -0.55
GGA3-213ENST00000582486 GOLGA6AQ9NYA3 693 aa11.62□□□□□ -0.55
GGA3-213ENST00000582486 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.62□□□□□ -0.554e-11■■■■□ 24.4
GGA3-213ENST00000582486 MFHAS1Q9Y4C4 1052 aa11.62□□□□□ -0.55
GGA3-213ENST00000582486 SF3B1O75533 1304 aaKnown RBP eCLIP11.62□□□□□ -0.556e-8■■■■■ 80.2
GGA3-213ENST00000582486 KIAA0100Q14667 2235 aaKnown RBP11.62□□□□□ -0.55
GGA3-213ENST00000582486 I6L893 689 aaPredicted RBP11.61□□□□□ -0.55
GGA3-213ENST00000582486 CREB3O43889 395 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 AMHP03971 560 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 MYZAPP0CAP1 466 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 STIP1P31948 543 aaKnown RBP11.61□□□□□ -0.55
GGA3-213ENST00000582486 ADRA1BP35368 520 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 PGFP49763 221 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 ARPP19P56211 112 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 IFFO1Q0D2I5 559 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 IKBKEQ14164 716 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 EFHC2Q5JST6 749 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 RTP2Q5QGT7 225 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 RNASEH2BQ5TBB1 312 aaKnown RBP11.61□□□□□ -0.55
GGA3-213ENST00000582486 ZNF280DQ6N043 979 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 TAS1R1Q7RTX1 841 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 LRRC43Q8N309 656 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 TAB3Q8N5C8 712 aaPredicted RBP11.61□□□□□ -0.55
GGA3-213ENST00000582486 CCDC33Q8N5R6 958 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 ATAD1Q8NBU5 361 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 BCL7CQ8WUZ0 217 aaPredicted RBP11.61□□□□□ -0.55
GGA3-213ENST00000582486 FUBP3Q96I24 572 aaKnown RBP eCLIP11.61□□□□□ -0.55
GGA3-213ENST00000582486 SLC9A7Q96T83 725 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 TMEM175Q9BSA9 504 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 CENPHQ9H3R5 247 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 USP29Q9HBJ7 922 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 TMBIM4Q9HC24 238 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 RRN3Q9NYV6 651 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 FBXW11Q9UKB1 542 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 GOLGA6L10A6NI86 522 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 NUDT17P0C025 328 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 ZFXP17010 805 aaPredicted RBP11.61□□□□□ -0.55
GGA3-213ENST00000582486 RBL1P28749 1068 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 CTCFP49711 727 aaPredicted RBP11.61□□□□□ -0.55
GGA3-213ENST00000582486 MORF4L2Q15014 288 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 NCBP2-AS2Q69YL0 99 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 FBXO46Q6PJ61 603 aaPredicted RBP11.61□□□□□ -0.55
GGA3-213ENST00000582486 RSPO2Q6UXX9 243 aaPredicted RBP11.61□□□□□ -0.55
GGA3-213ENST00000582486 TRMT10CQ7L0Y3 403 aaKnown RBP11.61□□□□□ -0.55
GGA3-213ENST00000582486 ZCCHC9Q8N567 271 aaKnown RBP11.61□□□□□ -0.55
GGA3-213ENST00000582486 SH2D3CQ8N5H7 860 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 RNF139Q8WU17 664 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 PAWRQ96IZ0 340 aaKnown RBP11.61□□□□□ -0.55
GGA3-213ENST00000582486 ARHGEF4Q9NR80 690 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 PCDH10Q9P2E7 1040 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 RCOR3Q9P2K3 495 aaPredicted RBP11.61□□□□□ -0.55
GGA3-213ENST00000582486 PCDHB5Q9Y5E4 795 aa11.61□□□□□ -0.55
GGA3-213ENST00000582486 FNDC1Q4ZHG4 1894 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms