RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 MRPS23Q9Y3D9 190 aaKnown RBP9.95□□□□□ -0.82
RFFL-210ENST00000582308 DOCK4Q8N1I0 1966 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 XIRP2A4UGR9 3374 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 CLUHO75153 1309 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 M0QYT0 321 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 MSI1O43347 362 aaKnown RBP9.94□□□□□ -0.82
RFFL-210ENST00000582308 PROSCO94903 275 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 OLFM2O95897 454 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 TRUB2O95900 331 aaKnown RBP9.94□□□□□ -0.82
RFFL-210ENST00000582308 HDCP19113 662 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 KCNA5P22460 613 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 ATP5C1P36542 298 aaKnown RBP9.94□□□□□ -0.82
RFFL-210ENST00000582308 MTHFRP42898 656 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 SULT1E1P49888 294 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 ATXN1P54253 815 aaKnown RBP9.94□□□□□ -0.82
RFFL-210ENST00000582308 NAP1L1P55209 391 aaKnown RBP9.94□□□□□ -0.82
RFFL-210ENST00000582308 HDAC4P56524 1084 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 EIF4EBP2Q13542 120 aaPredicted RBP9.94□□□□□ -0.82
RFFL-210ENST00000582308 PIGHQ14442 188 aaPredicted RBP9.94□□□□□ -0.82
RFFL-210ENST00000582308 CBX2Q14781 532 aaPredicted RBP9.94□□□□□ -0.82
RFFL-210ENST00000582308 SKIV2LQ15477 1246 aaKnown RBP9.94□□□□□ -0.82
RFFL-210ENST00000582308 GPR158Q5T848 1215 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 DAB2IPQ5VWQ8 1189 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 SLFN11Q7Z7L1 901 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 FAM172AQ8WUF8 416 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 SUSD6Q92537 303 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 PGAP3Q96FM1 320 aaPredicted RBP9.94□□□□□ -0.82
RFFL-210ENST00000582308 CALR3Q96L12 384 aaKnown RBP9.94□□□□□ -0.82
RFFL-210ENST00000582308 CDK5RAP1Q96SZ6 601 aaKnown RBP9.94□□□□□ -0.82
RFFL-210ENST00000582308 KLF16Q9BXK1 252 aaPredicted RBP9.94□□□□□ -0.82
RFFL-210ENST00000582308 TASP1Q9H6P5 420 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 OLA1Q9NTK5 396 aaKnown RBP9.94□□□□□ -0.82
RFFL-210ENST00000582308 PIGVQ9NUD9 493 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 DDIT4Q9NX09 232 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 DNMT3LQ9UJW3 386 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 STAP1Q9ULZ2 295 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 HYOU1Q9Y4L1 999 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 ALG6Q9Y672 507 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 CAPN6Q9Y6Q1 641 aa9.94□□□□□ -0.82
RFFL-210ENST00000582308 SYNJ2BP-COX16A0A087WUM0 186 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 TRAV19A0A0A6YYK7 116 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 SLC12A8A0AV02 714 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 GOLGA6L9A6NEM1 432 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 GRXCR2A6NFK2 248 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 SOBPA7XYQ1 873 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 IRAK2O43187 625 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 LRCH4O75427 683 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 PALMO75781 387 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 IGLV3-27P01718 113 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 TCF4P15884 667 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 PFKLP17858 780 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 COMTP21964 271 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 DDX6P26196 483 aaKnown RBP eCLIP9.93□□□□□ -0.82
RFFL-210ENST00000582308 MIPP30301 263 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 MAN1A1P33908 653 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 CXCR3P49682 368 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 SLC7A9P82251 487 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 ZXDBP98169 803 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 DEUP1Q05D60 604 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 NME3Q13232 169 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 ACAP1Q15027 740 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 TRIP4Q15650 581 aaPredicted RBP9.93□□□□□ -0.82
RFFL-210ENST00000582308 IFI16Q16666 785 aaKnown RBP9.93□□□□□ -0.82
RFFL-210ENST00000582308 ARHGAP15Q53QZ3 475 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 C11orf63Q6NUN7 778 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 CC2D1AQ6P1N0 951 aaPredicted RBP9.93□□□□□ -0.82
RFFL-210ENST00000582308 STRADAQ7RTN6 431 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 DAAM2Q86T65 1068 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 TADA2BQ86TJ2 420 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 MIB1Q86YT6 1006 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 NPAS3Q8IXF0 933 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 CMTM8Q8IZV2 173 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 ADAMTS19Q8TE59 1207 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 FGF13Q92913 245 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 WBP2Q969T9 261 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 SLC39A13Q96H72 371 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 ZFRQ96KR1 1074 aaKnown RBP9.93□□□□□ -0.82
RFFL-210ENST00000582308 RIPOR3Q96MK2 946 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 POMKQ9H5K3 350 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 FAM204AQ9H8W3 233 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 GKN1Q9NS71 199 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 COX16Q9P0S2 106 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 RASAL2Q9UJF2 1139 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 USTQ9Y2C2 406 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 USP15Q9Y4E8 981 aaPredicted RBP9.93□□□□□ -0.82
RFFL-210ENST00000582308 NUP205Q92621 2012 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 COL6A3P12111 3177 aa9.93□□□□□ -0.82
RFFL-210ENST00000582308 I6L893 689 aaPredicted RBP9.92□□□□□ -0.82
RFFL-210ENST00000582308 RNF8O76064 485 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 F9P00740 461 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 CKMP06732 381 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 MBL2P11226 248 aaPredicted RBP9.92□□□□□ -0.82
RFFL-210ENST00000582308 IL1R2P27930 398 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 GBP1P32455 592 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 RDXP35241 583 aaKnown RBP9.92□□□□□ -0.82
RFFL-210ENST00000582308 PCK1P35558 622 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 KCNQ1P51787 676 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 TBX4P57082 545 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 TAS2R40P59535 323 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 NNTQ13423 1086 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms