RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 HEY1Q9Y5J3 304 aa23.52■■□□□ 1.36
CCDC47-204ENST00000582252 E7EVH7 732 aa23.51■■□□□ 1.35
CCDC47-204ENST00000582252 B3GAT3O94766 335 aa23.51■■□□□ 1.35
CCDC47-204ENST00000582252 POMCP01189 267 aa23.51■■□□□ 1.35
CCDC47-204ENST00000582252 TSHRP16473 764 aa23.51■■□□□ 1.35
CCDC47-204ENST00000582252 AIF1P55008 147 aa23.51■■□□□ 1.35
CCDC47-204ENST00000582252 NR1H3Q13133 447 aa23.51■■□□□ 1.35
CCDC47-204ENST00000582252 CCDC142Q17RM4 750 aa23.51■■□□□ 1.35
CCDC47-204ENST00000582252 PDIK1LQ8N165 341 aa23.51■■□□□ 1.35
CCDC47-204ENST00000582252 NT5C3BQ969T7 300 aa23.51■■□□□ 1.35
CCDC47-204ENST00000582252 NPY6RQ99463 290 aa23.51■■□□□ 1.35
CCDC47-204ENST00000582252 C10orf88Q9H8K7 445 aa23.51■■□□□ 1.35
CCDC47-204ENST00000582252 FZD10Q9ULW2 581 aa23.51■■□□□ 1.35
CCDC47-204ENST00000582252 TIMM13Q9Y5L4 95 aaPredicted RBP23.51■■□□□ 1.35
CCDC47-204ENST00000582252 TTC3P53804 2025 aa23.51■■□□□ 1.35
CCDC47-204ENST00000582252 MYBPHLA2RUH7 354 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 CAPN9O14815 690 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 INPPL1O15357 1258 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 KCNN4O15554 427 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 BEST1O76090 585 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 CXCL10P02778 98 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 RNASELQ05823 741 aaKnown RBP23.5■■□□□ 1.35
CCDC47-204ENST00000582252 MAPRE1Q15691 268 aaKnown RBP23.5■■□□□ 1.35
CCDC47-204ENST00000582252 NLRP14Q86W24 1093 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 THEM5Q8N1Q8 247 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 DBF4BQ8NFT6 615 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 ARHGEF2Q92974 986 aaKnown RBP23.5■■□□□ 1.35
CCDC47-204ENST00000582252 KCTD15Q96SI1 283 aaPredicted RBP23.5■■□□□ 1.35
CCDC47-204ENST00000582252 XPO7Q9UIA9 1087 aaKnown RBP23.5■■□□□ 1.35
CCDC47-204ENST00000582252 PRDM4Q9UKN5 801 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 EXOC1LA0A1B0GW35 172 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 GMNCA6NCL1 334 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 C9IYK1 514 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 M0QZQ0 153 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 CHADO15335 359 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 EOMESO95936 686 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 CYP2C18P33260 490 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 CCL23P55773 120 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 DAOAP59103 153 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 RAB41Q5JT25 222 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 TDRPQ86YL5 185 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 CCDC185Q8N715 623 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 ATP11CQ8NB49 1132 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 PYROXD1Q8WU10 500 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 SCLYQ96I15 445 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 SLC9A7Q96T83 725 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 SMOQ99835 787 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 ULBP1Q9BZM6 244 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 VPS37BQ9H9H4 285 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 PPANQ9NQ55 473 aaKnown RBP23.5■■□□□ 1.35
CCDC47-204ENST00000582252 INPP5FQ9Y2H2 1132 aa23.5■■□□□ 1.35
CCDC47-204ENST00000582252 E7ESA3 106 aa23.49■■□□□ 1.35
CCDC47-204ENST00000582252 H3BRJ5 948 aa23.49■■□□□ 1.35
CCDC47-204ENST00000582252 EBAG9O00559 213 aa23.49■■□□□ 1.35
CCDC47-204ENST00000582252 TRAPPC3O43617 180 aa23.49■■□□□ 1.35
CCDC47-204ENST00000582252 ZNF189O75820 626 aaPredicted RBP23.49■■□□□ 1.35
CCDC47-204ENST00000582252 ATP2A2P16615 1042 aaKnown RBP23.49■■□□□ 1.35
CCDC47-204ENST00000582252 ATXN1P54253 815 aaKnown RBP23.49■■□□□ 1.35
CCDC47-204ENST00000582252 DEUP1Q05D60 604 aa23.49■■□□□ 1.35
CCDC47-204ENST00000582252 INTS6LQ5JSJ4 861 aaKnown RBP23.49■■□□□ 1.35
CCDC47-204ENST00000582252 DCLRE1AQ6PJP8 1040 aa23.49■■□□□ 1.35
CCDC47-204ENST00000582252 B4GALNT4Q76KP1 1039 aa23.49■■□□□ 1.35
CCDC47-204ENST00000582252 BNIPLQ7Z465 357 aa23.49■■□□□ 1.35
CCDC47-204ENST00000582252 ZNF598Q86UK7 904 aaKnown RBP23.49■■□□□ 1.35
CCDC47-204ENST00000582252 RTN4RL1Q86UN2 441 aaPredicted RBP23.49■■□□□ 1.35
CCDC47-204ENST00000582252 LINC01599Q8WXQ3 324 aa23.49■■□□□ 1.35
CCDC47-204ENST00000582252 CSPG4P5Q96PW8 444 aa23.49■■□□□ 1.35
CCDC47-204ENST00000582252 KLC2Q9H0B6 622 aa23.49■■□□□ 1.35
CCDC47-204ENST00000582252 ACTL7BQ9Y614 415 aa23.49■■□□□ 1.35
CCDC47-204ENST00000582252 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.49■■□□□ 1.35
CCDC47-204ENST00000582252 HACD1B0YJ81 288 aa23.48■■□□□ 1.35
CCDC47-204ENST00000582252 M0QYT0 321 aa23.48■■□□□ 1.35
CCDC47-204ENST00000582252 FAM107AO95990 144 aa23.48■■□□□ 1.35
CCDC47-204ENST00000582252 CHN1P15882 459 aa23.48■■□□□ 1.35
CCDC47-204ENST00000582252 IBSPP21815 317 aaPredicted RBP23.48■■□□□ 1.35
CCDC47-204ENST00000582252 IGFBP6P24592 240 aaPredicted RBP23.48■■□□□ 1.35
CCDC47-204ENST00000582252 RFC2P35250 354 aa23.48■■□□□ 1.35
CCDC47-204ENST00000582252 SLC45A4Q5BKX6 768 aa23.48■■□□□ 1.35
CCDC47-204ENST00000582252 EFHC2Q5JST6 749 aa23.48■■□□□ 1.35
CCDC47-204ENST00000582252 EXOC3L1Q86VI1 746 aa23.48■■□□□ 1.35
CCDC47-204ENST00000582252 FAM131BQ86XD5 332 aa23.48■■□□□ 1.35
CCDC47-204ENST00000582252 SPATS2Q86XZ4 545 aaKnown RBP23.48■■□□□ 1.35
CCDC47-204ENST00000582252 IRGQQ8WZA9 623 aa23.48■■□□□ 1.35
CCDC47-204ENST00000582252 XPO6Q96QU8 1125 aaKnown RBP23.48■■□□□ 1.35
CCDC47-204ENST00000582252 PAAF1Q9BRP4 392 aa23.48■■□□□ 1.35
CCDC47-204ENST00000582252 TRIM62Q9BVG3 475 aa23.48■■□□□ 1.35
CCDC47-204ENST00000582252 USP29Q9HBJ7 922 aa23.48■■□□□ 1.35
CCDC47-204ENST00000582252 CSNK1G1Q9HCP0 422 aa23.48■■□□□ 1.35
CCDC47-204ENST00000582252 INTS9Q9NV88 658 aaKnown RBP23.48■■□□□ 1.35
CCDC47-204ENST00000582252 MTMR10Q9NXD2 777 aa23.48■■□□□ 1.35
CCDC47-204ENST00000582252 RSPH14Q9UHP6 348 aa23.48■■□□□ 1.35
CCDC47-204ENST00000582252 ALPK3Q96L96 1907 aa23.48■■□□□ 1.35
CCDC47-204ENST00000582252 GOLGA8MH3BSY2 632 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 EN2P19622 333 aaPredicted RBP23.47■■□□□ 1.35
CCDC47-204ENST00000582252 TYMPP19971 482 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 RBL1P28749 1068 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 CCT5P48643 541 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 NDUFV1P49821 464 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 FAM189BP81408 668 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 TSPY1Q01534 308 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms