RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 CISHQ9NSE2 258 aa12.22□□□□□ -0.45
CDK5RAP3-223ENST00000582114 MARK1Q9P0L2 795 aa12.22□□□□□ -0.45
CDK5RAP3-223ENST00000582114 STARD13Q9Y3M8 1113 aa12.22□□□□□ -0.45
CDK5RAP3-223ENST00000582114 CFAP47Q6ZTR5 3102 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 SLC12A8A0AV02 714 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 C1QTNF9BB2RNN3 333 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 TULP2O00295 520 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 C1QTNF9P0C862 333 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 EPB41P11171 864 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 CEACAM1P13688 526 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 ATXN3P54252 364 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 RAD23BP54727 409 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 ZNF33AQ06730 810 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 PNOCQ13519 176 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 GEN1Q17RS7 908 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 KLHDC10Q6PID8 442 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 SLC23A3Q6PIS1 610 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 SLC36A4Q6YBV0 504 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 RSRC2Q7L4I2 434 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 TADA2BQ86TJ2 420 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 CACUL1Q86Y37 369 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 DENND1CQ8IV53 801 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 TRIML1Q8N9V2 468 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 FBXL13Q8NEE6 735 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 ERCC4Q92889 916 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 TMEM176AQ96HP8 235 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 MRGPRX1Q96LB2 322 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 HSPA12BQ96MM6 686 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 GABRG3Q99928 467 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 CD248Q9HCU0 757 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 RAB20Q9NX57 234 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 RALYQ9UKM9 306 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 USP3Q9Y6I4 520 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 STON1Q9Y6Q2 735 aa12.21□□□□□ -0.45
CDK5RAP3-223ENST00000582114 ASCC3Q8N3C0 2202 aaKnown RBP12.21□□□□□ -0.46
CDK5RAP3-223ENST00000582114 PI4KAP42356 2102 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 USP24Q9UPU5 2620 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 SPAARA0A1B0GVQ0 90 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 A0A1W2PQ27 194 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 A0A1W2PQ64 194 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 A0A1W2PQD8 194 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 NDUFS2O75306 463 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 CSRP1P21291 193 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 MAOBP27338 520 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 GTF2H1P32780 548 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 PSEN1P49768 467 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 MFAP3P55082 362 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 YWHAGP61981 247 aaKnown RBP eCLIP12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 GFPT1Q06210 699 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 DUOXA1Q1HG43 343 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 GOLGA7BQ2TAP0 167 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 CBWD6Q4V339 395 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 CBWD3Q5JTY5 395 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 SPDYCQ5MJ68 293 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 CBWD5Q5RIA9 395 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 FYB2Q5VWT5 728 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 PIGZQ86VD9 579 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 RGL4Q8IZJ4 473 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 SORCS1Q8WY21 1168 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 ULBP1Q9BZM6 244 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 DNAI2Q9GZS0 605 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 SCAND2PQ9GZW5 306 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 CLIC5Q9NZA1 410 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 MARCH2Q9P0N8 246 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 AGO1Q9UL18 857 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 CLEC4EQ9ULY5 219 aa12.2□□□□□ -0.46
CDK5RAP3-223ENST00000582114 CETN3O15182 167 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 ZNF217O75362 1048 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 PENKP01210 267 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 IL12RB1P42701 662 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 PRCPP42785 496 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 TKTL1P51854 596 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 PMS1P54277 932 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 COG7P83436 770 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 ENPEPQ07075 957 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 LRMPQ12912 555 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 EDRF1Q3B7T1 1238 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 FUT11Q495W5 492 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 PEAR1Q5VY43 1037 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 UNQ6494/PRO21346Q6UXR6 183 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 HDDC3Q8N4P3 179 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 MINDY1Q8N5J2 469 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 CDK5RAP1Q96SZ6 601 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 SCNM1Q9BWG6 230 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 CIPCQ9C0C6 399 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 SLC32A1Q9H598 525 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 FBXO10Q9UK96 956 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 STRIP2Q9ULQ0 834 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 SLC6A14Q9UN76 642 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 WASF3Q9UPY6 502 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 ZNF510Q9Y2H8 683 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 ASPMQ8IZT6 3477 aa12.19□□□□□ -0.46
CDK5RAP3-223ENST00000582114 TRIM49BA6NDI0 452 aa12.18□□□□□ -0.46
CDK5RAP3-223ENST00000582114 HYAL3O43820 417 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-223ENST00000582114 STX10O60499 249 aa12.18□□□□□ -0.46
CDK5RAP3-223ENST00000582114 TSPAN3O60637 253 aa12.18□□□□□ -0.46
CDK5RAP3-223ENST00000582114 OPHN1O60890 802 aa12.18□□□□□ -0.46
CDK5RAP3-223ENST00000582114 ZBED1O96006 694 aa12.18□□□□□ -0.46
CDK5RAP3-223ENST00000582114 PROS1P07225 676 aa12.18□□□□□ -0.46
CDK5RAP3-223ENST00000582114 SERPINF2P08697 491 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms