RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 ADAT2Q7Z6V5 191 aaKnown RBP13.13□□□□□ -0.31
SRSF1-204ENST00000581979 KLHL7Q8IXQ5 586 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 ZMIZ2Q8NF64 920 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 KRT12Q99456 494 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 UBXN6Q9BZV1 441 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 ANKZF1Q9H8Y5 726 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 ZWILCHQ9H900 591 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 DDX56Q9NY93 547 aaKnown RBP13.13□□□□□ -0.31
SRSF1-204ENST00000581979 BACE2Q9Y5Z0 518 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 PATJQ8NI35 1801 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 LRCH4O75427 683 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 FBXO21O94952 628 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 ZRANB2O95218 330 aaKnown RBP eCLIP13.12□□□□□ -0.316e-7■■□□□ 12.2
SRSF1-204ENST00000581979 PDGFBP01127 241 aaPredicted RBP13.12□□□□□ -0.31
SRSF1-204ENST00000581979 KRT1P04264 644 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 POU2F2P09086 479 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 HNRNPA1P09651 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
SRSF1-204ENST00000581979 AVPR2P30518 371 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 CETN2P41208 172 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 VCPP55072 806 aaKnown RBP13.12□□□□□ -0.31
SRSF1-204ENST00000581979 C15orf59Q2T9L4 293 aaPredicted RBP13.12□□□□□ -0.31
SRSF1-204ENST00000581979 CCDC14Q49A88 953 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 ANKS3Q6ZW76 656 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 RTL10Q7L3V2 364 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 SLC13A5Q86YT5 568 aaPredicted RBP13.12□□□□□ -0.31
SRSF1-204ENST00000581979 EXD1Q8NHP7 514 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 FAM149B1Q96BN6 582 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 RBM41Q96IZ5 413 aaKnown RBP13.12□□□□□ -0.31
SRSF1-204ENST00000581979 CFAP57Q96MR6 1250 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 MYADMQ96S97 322 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 ULBP1Q9BZM6 244 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 PIDD1Q9HB75 910 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 CSNK1G1Q9HCP0 422 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 DMAP1Q9NPF5 467 aaPredicted RBP13.12□□□□□ -0.31
SRSF1-204ENST00000581979 KLHL11Q9NVR0 708 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.12□□□□□ -0.311e-15■■□□□ 13.8
SRSF1-204ENST00000581979 DUSP12Q9UNI6 340 aa13.12□□□□□ -0.31
SRSF1-204ENST00000581979 OR6C75A6NL08 312 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 H7C4K7 107 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 HSF2BPO75031 334 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 C8AP07357 584 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 KRT7P08729 469 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 OR1D2P34982 312 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 PCK1P35558 622 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 ATP11AP98196 1134 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 SLC25A11Q02978 314 aaKnown RBP13.11□□□□□ -0.31
SRSF1-204ENST00000581979 ADCY1Q08828 1119 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 MRPL58Q14197 206 aaKnown RBP13.11□□□□□ -0.31
SRSF1-204ENST00000581979 ATP13A4Q4VNC1 1196 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 RSPO2Q6UXX9 243 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-204ENST00000581979 POLNQ7Z5Q5 900 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 RCOR2Q8IZ40 523 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 ARFGAP1Q8N6T3 406 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 PRSS33Q8NF86 280 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 ANKRD7Q92527 254 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 NDRG1Q92597 394 aaKnown RBP13.11□□□□□ -0.31
SRSF1-204ENST00000581979 NXPE3Q969Y0 559 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 RNF25Q96BH1 459 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-204ENST00000581979 LRRC1Q9BTT6 524 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 PARD6BQ9BYG5 372 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 TMEM30AQ9NV96 361 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 ABI2Q9NYB9 513 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-204ENST00000581979 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.11□□□□□ -0.31
SRSF1-204ENST00000581979 PCSK1NQ9UHG2 260 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 DOCK6Q96HP0 2047 aa13.11□□□□□ -0.31
SRSF1-204ENST00000581979 HHLA1C9JL84 531 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 DAB1O75553 588 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 MIPP30301 263 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 GBP2P32456 591 aaPredicted RBP13.1□□□□□ -0.31
SRSF1-204ENST00000581979 GRIK1P39086 918 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 NUBP1P53384 320 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 ARPP19P56211 112 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 LLGL1Q15334 1064 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 NFE2Q16621 373 aaPredicted RBP13.1□□□□□ -0.31
SRSF1-204ENST00000581979 GLE1Q53GS7 698 aaKnown RBP13.1□□□□□ -0.31
SRSF1-204ENST00000581979 RAB41Q5JT25 222 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 PPM1LQ5SGD2 360 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 TXNRD3NBQ6F5E7 133 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 SLC8B1Q6J4K2 584 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 ARCQ7LC44 396 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 GPRIN1Q7Z2K8 1008 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 FAM172AQ8WUF8 416 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 MAIP1Q8WWC4 291 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 NCAPGQ9BPX3 1015 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 CNGB3Q9NQW8 809 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 ARGLU1Q9NWB6 273 aaPredicted RBP13.1□□□□□ -0.31
SRSF1-204ENST00000581979 USP18Q9UMW8 372 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 CDY1Q9Y6F8 540 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 ZFP37Q9Y6Q3 630 aaPredicted RBP13.1□□□□□ -0.31
SRSF1-204ENST00000581979 TARSL2A2RTX5 802 aaKnown RBP13.1□□□□□ -0.31
SRSF1-204ENST00000581979 SART1O43290 800 aaKnown RBP13.1□□□□□ -0.31
SRSF1-204ENST00000581979 TBC1D4O60343 1298 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 TRUB2O95900 331 aaKnown RBP13.1□□□□□ -0.31
SRSF1-204ENST00000581979 USP17L7P0C7H9 530 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 LAMP2P13473 410 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 CPB1P15086 417 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 CYP2F1P24903 491 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 PTPN9P43378 593 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 PTPN5P54829 565 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 DAOAP59103 153 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms