RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 GSCP56915 257 aaPredicted RBP16.2■□□□□ 0.18
SS18-216ENST00000580751 GPC5P78333 572 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 EFEMP1Q12805 493 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 USP4Q13107 963 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 TDGQ13569 410 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 C2CD6Q53TS8 623 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 MSANTD2Q6P1R3 559 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 VITQ6UXI7 678 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 MIB1Q86YT6 1006 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 MFSD6LQ8IWD5 586 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 RHOT2Q8IXI1 618 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 YAF2Q8IY57 180 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 KIAA1958Q8N8K9 716 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 SH3RF2Q8TEC5 729 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 RSAD2Q8WXG1 361 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 PIWIL1Q96J94 861 aaKnown RBP16.2■□□□□ 0.18
SS18-216ENST00000580751 THG1LQ9NWX6 298 aaKnown RBP16.2■□□□□ 0.18
SS18-216ENST00000580751 SMPD4Q9NXE4 827 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 MARCH2Q9P0N8 246 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 LCMT1Q9UIC8 334 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 RASAL2Q9UJF2 1139 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 NUDT5Q9UKK9 219 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 SORCS3Q9UPU3 1222 aa16.2■□□□□ 0.18
SS18-216ENST00000580751 TMCO5BA8MYB1 307 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 GOLGA8SH3BPF8 625 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 LEFTY2O00292 366 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 KIF5CO60282 957 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 DAB1O75553 588 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 ARHGAP25P42331 645 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 GALCP54803 685 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 HADHBP55084 474 aaKnown RBP16.19■□□□□ 0.18
SS18-216ENST00000580751 COG7P83436 770 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 FCHO2Q0JRZ9 810 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 PTP4A2Q12974 167 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 ZNF77Q15935 545 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 CC2D1AQ6P1N0 951 aaPredicted RBP16.19■□□□□ 0.18
SS18-216ENST00000580751 MCOLN2Q8IZK6 566 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 SLC44A3Q8N4M1 653 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 C3orf20Q8ND61 904 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 ST13P5Q8NFI4 369 aaPredicted RBP16.19■□□□□ 0.18
SS18-216ENST00000580751 RSPRY1Q96DX4 576 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 ZFRQ96KR1 1074 aaKnown RBP16.19■□□□□ 0.18
SS18-216ENST00000580751 SLC2A13Q96QE2 648 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 RPP25Q9BUL9 199 aaKnown RBP16.19■□□□□ 0.18
SS18-216ENST00000580751 TRMT61BQ9BVS5 477 aaKnown RBP16.19■□□□□ 0.18
SS18-216ENST00000580751 KLF16Q9BXK1 252 aaPredicted RBP16.19■□□□□ 0.18
SS18-216ENST00000580751 SMOC2Q9H3U7 446 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 CD320Q9NPF0 282 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 TRMT1Q9NXH9 659 aaKnown RBP16.19■□□□□ 0.18
SS18-216ENST00000580751 TAS2R14Q9NYV8 317 aa16.19■□□□□ 0.18
SS18-216ENST00000580751 MDM4O15151 490 aa16.18■□□□□ 0.18
SS18-216ENST00000580751 FYNP06241 537 aa16.18■□□□□ 0.18
SS18-216ENST00000580751 KPNA1P52294 538 aaPredicted RBP16.18■□□□□ 0.18
SS18-216ENST00000580751 GRM2Q14416 872 aa16.18■□□□□ 0.18
SS18-216ENST00000580751 TAF5Q15542 800 aa16.18■□□□□ 0.18
SS18-216ENST00000580751 DCAF6Q58WW2 860 aa16.18■□□□□ 0.18
SS18-216ENST00000580751 NYAP1Q6ZVC0 841 aa16.18■□□□□ 0.18
SS18-216ENST00000580751 ARCQ7LC44 396 aa16.18■□□□□ 0.18
SS18-216ENST00000580751 DEFB106AQ8N104 65 aa16.18■□□□□ 0.18
SS18-216ENST00000580751 TTC16Q8NEE8 873 aa16.18■□□□□ 0.18
SS18-216ENST00000580751 DQX1Q8TE96 717 aaKnown RBP16.18■□□□□ 0.18
SS18-216ENST00000580751 RFFLQ8WZ73 363 aa16.18■□□□□ 0.18
SS18-216ENST00000580751 SERPINB11Q96P15 392 aa16.18■□□□□ 0.18
SS18-216ENST00000580751 PLA2G2FQ9BZM2 168 aa16.18■□□□□ 0.18
SS18-216ENST00000580751 MRPL47Q9HD33 250 aaKnown RBP16.18■□□□□ 0.18
SS18-216ENST00000580751 RRN3Q9NYV6 651 aa16.18■□□□□ 0.18
SS18-216ENST00000580751 CFAP97Q9P2B7 532 aa16.18■□□□□ 0.18
SS18-216ENST00000580751 UVRAGQ9P2Y5 699 aa16.18■□□□□ 0.18
SS18-216ENST00000580751 LSM7Q9UK45 103 aaKnown RBP16.18■□□□□ 0.18
SS18-216ENST00000580751 NAALADL1Q9UQQ1 740 aa16.18■□□□□ 0.18
SS18-216ENST00000580751 SH3BP1Q9Y3L3 701 aa16.18■□□□□ 0.18
SS18-216ENST00000580751 HBS1LQ9Y450 684 aaKnown RBP16.18■□□□□ 0.18
SS18-216ENST00000580751 SLC12A8A0AV02 714 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 E2F8A0AVK6 867 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 CHADO15335 359 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 GRAP2O75791 330 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 MTA2O94776 668 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 CYP1A2P05177 515 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 SRFP11831 508 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 GDI1P31150 447 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 NOS2P35228 1153 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 MATKP42679 507 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 ZXDBP98169 803 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 NNTQ13423 1086 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 DNAJC24Q6P3W2 148 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 UBALD2Q8IYN6 164 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 KHSRPQ92945 711 aaKnown RBP eCLIP16.17■□□□□ 0.184e-7■■■□□ 16.7
SS18-216ENST00000580751 PLD4Q96BZ4 506 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 LRRC3BQ96PB8 259 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 SELENOOQ9BVL4 669 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 LACRTQ9GZZ8 138 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 BRD9Q9H8M2 597 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 METTL5Q9NRN9 209 aaKnown RBP16.17■□□□□ 0.18
SS18-216ENST00000580751 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.17■□□□□ 0.18
SS18-216ENST00000580751 MUTYHQ9UIF7 546 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 STAP1Q9ULZ2 295 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 DUSP12Q9UNI6 340 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 SCINQ9Y6U3 715 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 MYO10Q9HD67 2058 aa16.17■□□□□ 0.18
SS18-216ENST00000580751 USP27XA6NNY8 438 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms