RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 C4orf50Q6ZRC1 276 aa14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 TMC6Q7Z403 805 aa14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 CD302Q8IX05 232 aa14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 DIS3L2Q8IYB7 885 aaKnown RBP14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 LSMEM2Q8N112 164 aa14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 FAM26EQ8N5C1 309 aa14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 KCNB2Q92953 911 aa14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 FBXO32Q969P5 355 aa14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 SLITRK1Q96PX8 696 aa14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 PCED1AQ9H1Q7 454 aa14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 ORC3Q9UBD5 711 aaPredicted RBP14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 PLEKHB1Q9UF11 243 aaPredicted RBP14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 DERAQ9Y315 318 aa14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 C2CD2Q9Y426 696 aa14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 OPA1O60313 960 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 CTDNEP1O95476 244 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 TBX18O95935 607 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 ACP1P24666 158 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 RACK1P63244 317 aaKnown RBP14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 NOP14P78316 857 aaKnown RBP14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 FOXK1P85037 733 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 DAB2P98082 770 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 AAMPQ13685 434 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 KYAT1Q16773 422 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 SOWAHAQ2M3V2 549 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 MDH1BQ5I0G3 518 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 HECTD3Q5T447 861 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 SFMBT2Q5VUG0 894 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 CDCP2Q5VXM1 449 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 VSTM1Q6UX27 236 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 USP53Q70EK8 1073 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 KANSL1Q7Z3B3 1105 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 CACTIN-AS1Q8N1I8 211 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 SCAMP5Q8TAC9 235 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 PCED1BQ96HM7 432 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 DEPDC7Q96QD5 511 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 TSPAN18Q96SJ8 248 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 PLIN2Q99541 437 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 NACA2Q9H009 215 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 BTBD1Q9H0C5 482 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 BRMS1Q9HCU9 246 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 POLQO75417 2590 aa14.89□□□□□ -0.03
CSNK1D-213ENST00000580446 TCHHQ07283 1943 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 CLDN5O00501 218 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 ACO1P21399 889 aaKnown RBP14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 PCSK1P29120 753 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 RBMS1P29558 406 aaKnown RBP14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 MFAP3P55082 362 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 CYP4F2P78329 520 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 ENPP2Q13822 863 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 KIAA0895LQ68EN5 471 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 SERPINA13PQ6UXR4 307 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 HS2ST1Q7LGA3 356 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 C1orf127Q8N9H9 656 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 OR2T3Q8NH03 318 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 KBTBD7Q8WVZ9 684 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 ZNF274Q96GC6 653 aaPredicted RBP14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 ATXN7L3BQ96GX2 97 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 CCNL2Q96S94 520 aaPredicted RBP14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 CIPCQ9C0C6 399 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 ZNF518BQ9C0D4 1074 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 GDF3Q9NR23 364 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 WDR35Q9P2L0 1181 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 CLEC4EQ9ULY5 219 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 DNM3Q9UQ16 869 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 NME7Q9Y5B8 376 aa14.88□□□□□ -0.03
CSNK1D-213ENST00000580446 A0A1B0GVM2 712 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 GABRDO14764 452 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 FFAR2O15552 330 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 KRT19P08727 400 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 FDPSP14324 419 aaKnown RBP14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 YWHAQP27348 245 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 PPP3CCP48454 512 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 ARRB1P49407 418 aaPredicted RBP14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 SKOR1P84550 965 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 CLCA4Q14CN2 919 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 TGIF1Q15583 401 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 SGO2Q562F6 1265 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 TMEM86AQ8N2M4 240 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 ZSWIM2Q8NEG5 633 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 PHF12Q96QT6 1004 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 ASB7Q9H672 318 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 C17orf75Q9HAS0 396 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 MARK1Q9P0L2 795 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 PLAAQ9Y263 795 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 SETD2Q9BYW2 2564 aaPredicted RBP14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 ICE1Q9Y2F5 2266 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 BSNQ9UPA5 3926 aa14.87□□□□□ -0.03
CSNK1D-213ENST00000580446 PLXNA2O75051 1894 aa14.86□□□□□ -0.03
CSNK1D-213ENST00000580446 A0A1W2PR77 199 aa14.86□□□□□ -0.03
CSNK1D-213ENST00000580446 K7ENM7 598 aa14.86□□□□□ -0.03
CSNK1D-213ENST00000580446 MDM4O15151 490 aa14.86□□□□□ -0.03
CSNK1D-213ENST00000580446 AFMP43652 599 aa14.86□□□□□ -0.03
CSNK1D-213ENST00000580446 NCKAP1LP55160 1127 aa14.86□□□□□ -0.03
CSNK1D-213ENST00000580446 NXPH1P58417 271 aa14.86□□□□□ -0.03
CSNK1D-213ENST00000580446 RPS14P62263 151 aaKnown RBP14.86□□□□□ -0.03
CSNK1D-213ENST00000580446 E2F1Q01094 437 aa14.86□□□□□ -0.03
CSNK1D-213ENST00000580446 ZNF787Q6DD87 383 aa14.86□□□□□ -0.03
CSNK1D-213ENST00000580446 ADALQ6DHV7 355 aa14.86□□□□□ -0.03
CSNK1D-213ENST00000580446 SPATS2Q86XZ4 545 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms