RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 DENND5BQ6ZUT9 1274 aa20.46■□□□□ 0.87
LIMD2-209ENST00000580222 TMEM25Q86YD3 366 aa20.46■□□□□ 0.87
LIMD2-209ENST00000580222 NT5DC4Q86YG4 428 aa20.46■□□□□ 0.87
LIMD2-209ENST00000580222 ADGRF2Q8IZF7 708 aa20.46■□□□□ 0.87
LIMD2-209ENST00000580222 KIAA1958Q8N8K9 716 aa20.46■□□□□ 0.87
LIMD2-209ENST00000580222 IPO4Q8TEX9 1081 aaKnown RBP20.46■□□□□ 0.87
LIMD2-209ENST00000580222 SETD7Q8WTS6 366 aaKnown RBP20.46■□□□□ 0.87
LIMD2-209ENST00000580222 KBTBD7Q8WVZ9 684 aa20.46■□□□□ 0.87
LIMD2-209ENST00000580222 ZFRQ96KR1 1074 aaKnown RBP20.46■□□□□ 0.87
LIMD2-209ENST00000580222 BPIFA3Q9BQP9 254 aa20.46■□□□□ 0.87
LIMD2-209ENST00000580222 THAP9Q9H5L6 903 aa20.46■□□□□ 0.87
LIMD2-209ENST00000580222 GDAP2Q9NXN4 497 aa20.46■□□□□ 0.87
LIMD2-209ENST00000580222 RAD54BQ9Y620 910 aa20.46■□□□□ 0.87
LIMD2-209ENST00000580222 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.45■□□□□ 0.86
LIMD2-209ENST00000580222 TNNI1P19237 187 aa20.45■□□□□ 0.86
LIMD2-209ENST00000580222 NTSR1P30989 418 aa20.45■□□□□ 0.86
LIMD2-209ENST00000580222 GRIK1P39086 918 aa20.45■□□□□ 0.86
LIMD2-209ENST00000580222 VAMP7P51809 220 aa20.45■□□□□ 0.86
LIMD2-209ENST00000580222 ZNF445P59923 1031 aa20.45■□□□□ 0.86
LIMD2-209ENST00000580222 DCAF17Q5H9S7 520 aaPredicted RBP20.45■□□□□ 0.86
LIMD2-209ENST00000580222 TCERG1LQ5VWI1 586 aa20.45■□□□□ 0.86
LIMD2-209ENST00000580222 WDR49Q8IV35 697 aa20.45■□□□□ 0.86
LIMD2-209ENST00000580222 FAM114A1Q8IWE2 563 aa20.45■□□□□ 0.86
LIMD2-209ENST00000580222 PLEKHO2Q8TD55 490 aa20.45■□□□□ 0.86
LIMD2-209ENST00000580222 TMC2Q8TDI7 906 aa20.45■□□□□ 0.86
LIMD2-209ENST00000580222 SLC39A7Q92504 469 aa20.45■□□□□ 0.86
LIMD2-209ENST00000580222 ANKRD36BP1Q96IX9 119 aa20.45■□□□□ 0.86
LIMD2-209ENST00000580222 FAM124BQ9H5Z6 455 aaPredicted RBP20.45■□□□□ 0.86
LIMD2-209ENST00000580222 PRDM16Q9HAZ2 1276 aa20.45■□□□□ 0.86
LIMD2-209ENST00000580222 METTL14Q9HCE5 456 aaKnown RBP20.45■□□□□ 0.86
LIMD2-209ENST00000580222 MAGEC2Q9UBF1 373 aaPredicted RBP20.45■□□□□ 0.86
LIMD2-209ENST00000580222 ARMCX3Q9UH62 379 aaPredicted RBP20.45■□□□□ 0.86
LIMD2-209ENST00000580222 FNDC3AQ9Y2H6 1198 aaKnown RBP20.45■□□□□ 0.86
LIMD2-209ENST00000580222 NAV2Q8IVL1 2488 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 GOLGA8CPA6NN73 597 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 LRRIQ3A6PVS8 624 aaPredicted RBP20.44■□□□□ 0.86
LIMD2-209ENST00000580222 SMTNL1A8MU46 457 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 TNNC2P02585 160 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 PLA2G2AP14555 144 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 ITPKBP27987 946 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 LHX1P48742 406 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 TAF10Q12962 218 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 LIMS2Q7Z4I7 341 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 CREBRFQ8IUR6 639 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 SCUBE3Q8IX30 993 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 TERB1Q8NA31 727 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 KCNV2Q8TDN2 545 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 PARD3BQ8TEW8 1205 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 CACTINQ8WUQ7 758 aaKnown RBP20.44■□□□□ 0.86
LIMD2-209ENST00000580222 UBL7Q96S82 380 aaPredicted RBP20.44■□□□□ 0.86
LIMD2-209ENST00000580222 SYT15Q9BQS2 421 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 DEC1Q9P2X7 70 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 BTBD3Q9Y2F9 522 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 NME7Q9Y5B8 376 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 PTPRJQ12913 1337 aa20.44■□□□□ 0.86
LIMD2-209ENST00000580222 MYOFQ9NZM1 2061 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 BECN2A8MW95 431 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 F8VP50 259 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 HOXC11O43248 304 aaPredicted RBP20.43■□□□□ 0.86
LIMD2-209ENST00000580222 ZNF217O75362 1048 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 PDGFRBP09619 1106 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 TRIM49P0CI25 452 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 TRIM49CP0CI26 452 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 MBL2P11226 248 aaPredicted RBP20.43■□□□□ 0.86
LIMD2-209ENST00000580222 PCSK1P29120 753 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 DLG4P78352 724 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 GAD2Q05329 585 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 HSP90AA4PQ58FG1 418 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 VSTM1Q6UX27 236 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 BBS7Q8IWZ6 715 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 TOP6BLQ8N6T0 577 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 LRRC52Q8N7C0 313 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 PIP4K2CQ8TBX8 421 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 MRGPRX1Q96LB2 322 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 MTMR12Q9C0I1 747 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 MMRN2Q9H8L6 949 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 SAMSN1Q9NSI8 373 aaKnown RBP20.43■□□□□ 0.86
LIMD2-209ENST00000580222 INTS13Q9NVM9 706 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 STARD13Q9Y3M8 1113 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 PTPRBP23467 1997 aa20.43■□□□□ 0.86
LIMD2-209ENST00000580222 WASH3PC4AMC7 463 aa20.42■□□□□ 0.86
LIMD2-209ENST00000580222 PRRT4C9JH25 899 aa20.42■□□□□ 0.86
LIMD2-209ENST00000580222 IKBKBO14920 756 aa20.42■□□□□ 0.86
LIMD2-209ENST00000580222 CILPO75339 1184 aa20.42■□□□□ 0.86
LIMD2-209ENST00000580222 MARSP56192 900 aaKnown RBP20.42■□□□□ 0.86
LIMD2-209ENST00000580222 ENPEPQ07075 957 aa20.42■□□□□ 0.86
LIMD2-209ENST00000580222 DUOXA2Q1HG44 320 aa20.42■□□□□ 0.86
LIMD2-209ENST00000580222 DBX2Q6ZNG2 339 aa20.42■□□□□ 0.86
LIMD2-209ENST00000580222 C4orf50Q6ZRC1 276 aa20.42■□□□□ 0.86
LIMD2-209ENST00000580222 TRMT11Q7Z4G4 463 aaKnown RBP20.42■□□□□ 0.86
LIMD2-209ENST00000580222 ZCCHC9Q8N567 271 aaKnown RBP20.42■□□□□ 0.86
LIMD2-209ENST00000580222 DNASE2BQ8WZ79 361 aa20.42■□□□□ 0.86
LIMD2-209ENST00000580222 PCED1BQ96HM7 432 aa20.42■□□□□ 0.86
LIMD2-209ENST00000580222 DCBLD2Q96PD2 775 aa20.42■□□□□ 0.86
LIMD2-209ENST00000580222 ANP32EQ9BTT0 268 aa20.42■□□□□ 0.86
LIMD2-209ENST00000580222 GAREM1Q9H706 876 aa20.42■□□□□ 0.86
LIMD2-209ENST00000580222 CBX8Q9HC52 389 aa20.42■□□□□ 0.86
LIMD2-209ENST00000580222 SUSD2Q9UGT4 822 aa20.42■□□□□ 0.86
LIMD2-209ENST00000580222 MYO18AQ92614 2054 aaKnown RBP20.42■□□□□ 0.86
LIMD2-209ENST00000580222 E2F8A0AVK6 867 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms