RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 CPA6Q8N4T0 437 aa16.06■□□□□ 0.16
IFT20-208ENST00000578985 PLD4Q96BZ4 506 aa16.06■□□□□ 0.16
IFT20-208ENST00000578985 OTUB2Q96DC9 234 aa16.06■□□□□ 0.16
IFT20-208ENST00000578985 MRFAP1L1Q96HT8 127 aa16.06■□□□□ 0.16
IFT20-208ENST00000578985 SHDQ96IW2 340 aa16.06■□□□□ 0.16
IFT20-208ENST00000578985 DCLK3Q9C098 648 aa16.06■□□□□ 0.16
IFT20-208ENST00000578985 C8orf33Q9H7E9 229 aaPredicted RBP16.06■□□□□ 0.16
IFT20-208ENST00000578985 F5P12259 2224 aa16.06■□□□□ 0.16
IFT20-208ENST00000578985 FAM86C2PA6NEL3 165 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 TMCO5BA8MYB1 307 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 DDX3XO00571 662 aaKnown RBP eCLIP16.05■□□□□ 0.166e-11■■■■□ 22.8
IFT20-208ENST00000578985 MFAP3LO75121 409 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 NFATC1O95644 943 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 GLULP15104 373 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 CORO1AP31146 461 aaKnown RBP16.05■□□□□ 0.16
IFT20-208ENST00000578985 MLLT6P55198 1093 aaPredicted RBP16.05■□□□□ 0.16
IFT20-208ENST00000578985 ADKP55263 362 aaKnown RBP16.05■□□□□ 0.16
IFT20-208ENST00000578985 CDK17Q00537 523 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 C1QBPQ07021 282 aaKnown RBP16.05■□□□□ 0.16
IFT20-208ENST00000578985 PTP4A2Q12974 167 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 NR1H3Q13133 447 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 TRIP4Q15650 581 aaPredicted RBP16.05■□□□□ 0.16
IFT20-208ENST00000578985 Q6ZNB5 142 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 TPRG1Q6ZUI0 275 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 MON1BQ7L1V2 547 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 PHLDB2Q86SQ0 1253 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 TAC4Q86UU9 113 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 VPS36Q86VN1 386 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 DRC7Q8IY82 874 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 ADAM32Q8TC27 787 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 SERPINB11Q96P15 392 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 DNAJC7Q99615 494 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.05■□□□□ 0.16
IFT20-208ENST00000578985 C1QTNF1Q9BXJ1 281 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 ECT2Q9H8V3 914 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 ZNHIT6Q9NWK9 470 aaKnown RBP16.05■□□□□ 0.16
IFT20-208ENST00000578985 TAS2R14Q9NYV8 317 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 WDR35Q9P2L0 1181 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 ZNF510Q9Y2H8 683 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 PIAS3Q9Y6X2 628 aa16.05■□□□□ 0.16
IFT20-208ENST00000578985 OTOL1A6NHN0 477 aaPredicted RBP16.04■□□□□ 0.16
IFT20-208ENST00000578985 AKR1B15C9JRZ8 316 aaPredicted RBP16.04■□□□□ 0.16
IFT20-208ENST00000578985 TRUB2O95900 331 aaKnown RBP16.04■□□□□ 0.16
IFT20-208ENST00000578985 KLKB1P03952 638 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 PLEKP08567 350 aaPredicted RBP16.04■□□□□ 0.16
IFT20-208ENST00000578985 GZMAP12544 262 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 NOS2P35228 1153 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 MATKP42679 507 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 SOX9P48436 509 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 HARS2P49590 506 aaKnown RBP16.04■□□□□ 0.16
IFT20-208ENST00000578985 TBX4P57082 545 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 STARD6P59095 220 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 NNTQ13423 1086 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 ARID5BQ14865 1188 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 MCOLN2Q8IZK6 566 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 ADGRG2Q8IZP9 1017 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 PBXIP1Q96AQ6 731 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 MFSD1Q9H3U5 465 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 FAM204AQ9H8W3 233 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 TBC1D17Q9HA65 648 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 C11orf16Q9NQ32 467 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.04■□□□□ 0.16
IFT20-208ENST00000578985 ARHGAP20Q9P2F6 1191 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 TMEM59LQ9UK28 342 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 COL4A3Q01955 1670 aa16.04■□□□□ 0.16
IFT20-208ENST00000578985 SPECC1L-ADORA2AF8WAN1 911 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 STK25O00506 426 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 MAN2B1O00754 1011 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 GPR37L1O60883 481 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 RTN2O75298 545 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 PDGFBP01127 241 aaPredicted RBP16.03■□□□□ 0.16
IFT20-208ENST00000578985 IGLV3-25P01717 112 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 IGLV3-27P01718 113 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 FTLP02792 175 aaPredicted RBP16.03■□□□□ 0.16
IFT20-208ENST00000578985 CYP17A1P05093 508 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 COL9A1P20849 921 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 GBP1P32455 592 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 CTHP32929 405 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 GSCP56915 257 aaPredicted RBP16.03■□□□□ 0.16
IFT20-208ENST00000578985 PITX1P78337 314 aaPredicted RBP16.03■□□□□ 0.16
IFT20-208ENST00000578985 RING1Q06587 406 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 DHCR24Q15392 516 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 TMEM31Q5JXX7 168 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 RHBDF2Q6PJF5 856 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 WDR59Q6PJI9 974 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 BMP8AQ7Z5Y6 402 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 RALGPS2Q86X27 583 aaPredicted RBP16.03■□□□□ 0.16
IFT20-208ENST00000578985 DENND1CQ8IV53 801 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 CNGA4Q8IV77 575 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 UNC45BQ8IWX7 931 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 FLCNQ8NFG4 579 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 MSANTD3Q96H12 275 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 VCPIP1Q96JH7 1222 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 FCRL2Q96LA5 508 aaPredicted RBP16.03■□□□□ 0.16
IFT20-208ENST00000578985 METTL5Q9NRN9 209 aaKnown RBP16.03■□□□□ 0.16
IFT20-208ENST00000578985 ABHD10Q9NUJ1 306 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 RRN3Q9NYV6 651 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 ADAMTS1Q9UHI8 967 aa16.03■□□□□ 0.16
IFT20-208ENST00000578985 AGO1Q9UL18 857 aaKnown RBP16.03■□□□□ 0.16
IFT20-208ENST00000578985 TLR6Q9Y2C9 796 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms