RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 DENND4AQ7Z401 1863 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 FRYLO94915 3013 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 SYNJ2BP-COX16A0A087WUM0 186 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 FAM170AA1A519 330 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 SYCE3A1L190 88 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 E5RJQ4 531 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 MSI1O43347 362 aaKnown RBP6.84□□□□□ -1.31
TRAF4-213ENST00000578917 TSPAN3O60637 253 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 TULP3O75386 442 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 GFPT2O94808 682 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 LMNAP02545 664 aaKnown RBP6.84□□□□□ -1.31
TRAF4-213ENST00000578917 KLKB1P03952 638 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 CCDC172P0C7W6 258 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 PNMA6AP0CW24 399 aaPredicted RBP6.84□□□□□ -1.31
TRAF4-213ENST00000578917 CYP11B1P15538 503 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 GBP1P32455 592 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 CLCN1P35523 988 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 TIE1P35590 1138 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 NBL1P41271 181 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 STAT1P42224 750 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 TNFRSF4P43489 277 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 PXNP49023 591 aaPredicted RBP6.84□□□□□ -1.31
TRAF4-213ENST00000578917 TBX4P57082 545 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 RNASE9P60153 205 aaKnown RBP6.84□□□□□ -1.31
TRAF4-213ENST00000578917 CDK17Q00537 523 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 KCNMA1Q12791 1236 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 MPPE1Q53F39 396 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 DCAF6Q58WW2 860 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 EFHC1Q5JVL4 640 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 C10orf76Q5T2E6 689 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 PRR23BQ6ZRT6 265 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 TOGARAM2Q6ZUX3 1019 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 TMEM110Q86TL2 294 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 ERICH1Q86X53 443 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 FAM71AQ8IYT1 594 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 MAML2Q8IZL2 1156 aaPredicted RBP6.84□□□□□ -1.31
TRAF4-213ENST00000578917 ZNF687Q8N1G0 1237 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 PGBD3Q8N328 593 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 CCDC33Q8N5R6 958 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 ADAM32Q8TC27 787 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 CLEC4CQ8WTT0 213 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 ACDQ96AP0 544 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 PLD4Q96BZ4 506 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 TMA16Q96EY4 203 aaKnown RBP6.84□□□□□ -1.31
TRAF4-213ENST00000578917 DDX50Q9BQ39 737 aaKnown RBP6.84□□□□□ -1.31
TRAF4-213ENST00000578917 SLC4A5Q9BY07 1137 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 LHX5Q9H2C1 402 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 POPDC2Q9HBU9 364 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 NLRC4Q9NPP4 1024 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 PLCB1Q9NQ66 1216 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 SEPT11Q9NVA2 429 aaKnown RBP6.84□□□□□ -1.31
TRAF4-213ENST00000578917 COX16Q9P0S2 106 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 BCCIPQ9P287 314 aaKnown RBP eCLIP6.84□□□□□ -1.31
TRAF4-213ENST00000578917 LIMA1Q9UHB6 759 aaKnown RBP6.84□□□□□ -1.31
TRAF4-213ENST00000578917 AGO1Q9UL18 857 aaKnown RBP6.84□□□□□ -1.31
TRAF4-213ENST00000578917 NAALADL1Q9UQQ1 740 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 FHOD1Q9Y613 1164 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 TSC2P49815 1807 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 ZNF318Q5VUA4 2279 aa6.84□□□□□ -1.31
TRAF4-213ENST00000578917 TYW5A2RUC4 315 aaKnown RBP6.83□□□□□ -1.32
TRAF4-213ENST00000578917 LRRC10BA6NIK2 292 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 LGALS16A8MUM7 142 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 CHURC1-FNTBB4DL54 471 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 F8VZ95 297 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 K7EQS6 105 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 HOXC11O43248 304 aaPredicted RBP6.83□□□□□ -1.32
TRAF4-213ENST00000578917 GRAP2O75791 330 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 GABBR2O75899 941 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 ALDH1A2O94788 518 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 KLF8O95600 359 aaPredicted RBP6.83□□□□□ -1.32
TRAF4-213ENST00000578917 MOCS2O96007 188 aaPredicted RBP6.83□□□□□ -1.32
TRAF4-213ENST00000578917 APOEP02649 317 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 ATP1A3P13637 1013 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 ABCB4P21439 1286 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 SOX5P35711 763 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 OPRD1P41143 372 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 EIF2DP41214 584 aaKnown RBP6.83□□□□□ -1.32
TRAF4-213ENST00000578917 FNTBP49356 437 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 DGKGP49619 791 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 KLK7P49862 253 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 DGKEP52429 567 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 NME3Q13232 169 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 PDCLQ13371 301 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 MAPK8IP2Q13387 824 aaPredicted RBP6.83□□□□□ -1.32
TRAF4-213ENST00000578917 GAS6Q14393 721 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 DMC1Q14565 340 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 E2F5Q15329 346 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 TRIP4Q15650 581 aaPredicted RBP6.83□□□□□ -1.32
TRAF4-213ENST00000578917 MEA1Q16626 185 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 ADGRF1Q5T601 910 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 EMC10Q5UCC4 262 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 NUGGCQ68CJ6 796 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 SMYD5Q6GMV2 418 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 SND1Q7KZF4 910 aaKnown RBP eCLIP6.83□□□□□ -1.32
TRAF4-213ENST00000578917 TRMT11Q7Z4G4 463 aaKnown RBP6.83□□□□□ -1.32
TRAF4-213ENST00000578917 LONP2Q86WA8 852 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 CHPFQ8IZ52 775 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 SCML4Q8N228 414 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 CAMKK1Q8N5S9 505 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 ALLCQ8N6M5 410 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms