RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-208	ENST00000578630	DEFB106A	Q8N104	65 aa		12.03	□□□□□ -0.48
ERBB2-208	ENST00000578630	FAM3C	Q92520	227 aa		12.03	□□□□□ -0.48
ERBB2-208	ENST00000578630	ASIC4	Q96FT7	647 aa		12.03	□□□□□ -0.48
ERBB2-208	ENST00000578630	MRFAP1L1	Q96HT8	127 aa		12.03	□□□□□ -0.48
ERBB2-208	ENST00000578630	VCPIP1	Q96JH7	1222 aa		12.03	□□□□□ -0.48
ERBB2-208	ENST00000578630	SERPINB11	Q96P15	392 aa		12.03	□□□□□ -0.48
ERBB2-208	ENST00000578630	ECT2	Q9H8V3	914 aa		12.03	□□□□□ -0.48
ERBB2-208	ENST00000578630	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
ERBB2-208	ENST00000578630	TJP2	Q9UDY2	1190 aa		12.03	□□□□□ -0.48
ERBB2-208	ENST00000578630	SLC12A6	Q9UHW9	1150 aa		12.03	□□□□□ -0.48
ERBB2-208	ENST00000578630	STAP1	Q9ULZ2	295 aa		12.03	□□□□□ -0.48
ERBB2-208	ENST00000578630	PIAS3	Q9Y6X2	628 aa		12.03	□□□□□ -0.48
ERBB2-208	ENST00000578630	KANSL1L	A0AUZ9	987 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	KRBA1	A5PL33	1030 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	AKR1B15	C9JRZ8	316 aa	Predicted RBP	12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	GOLGA8S	H3BPF8	625 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	RTN2	O75298	545 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	GRAP2	O75791	330 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	TRUB2	O95900	331 aa	Known RBP	12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	ADH1C	P00326	375 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	F9	P00740	461 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	SLC2A3	P11169	496 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	ARSA	P15289	507 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	HNRNPH3	P31942	346 aa	Known RBP	12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	MATK	P42679	507 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	SLC11A2	P49281	568 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	CLCN5	P51795	746 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	ZNF75D	P51815	510 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	GAD2	Q05329	585 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	RING1	Q06587	406 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	C1QBP	Q07021	282 aa	Known RBP	12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	MTA1	Q13330	715 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	NNT	Q13423	1086 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	DHCR24	Q15392	516 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	FAM102A	Q5T9C2	384 aa	Predicted RBP	12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	SYPL2	Q5VXT5	272 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	NUGGC	Q68CJ6	796 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	TPRG1	Q6ZUI0	275 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	ARC	Q7LC44	396 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	DENND1C	Q8IV53	801 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	CNGA4	Q8IV77	575 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	BBS7	Q8IWZ6	715 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	FLCN	Q8NFG4	579 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	TTC8	Q8TAM2	541 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	RIN3	Q8TB24	985 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	DQX1	Q8TE96	717 aa	Known RBP	12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	RNF34	Q969K3	372 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	AZIN2	Q96A70	460 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	SLC2A13	Q96QE2	648 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	DDX50	Q9BQ39	737 aa	Known RBP	12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	C11orf70	Q9BRQ4	267 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	SELENOO	Q9BVL4	669 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	HPS4	Q9NQG7	708 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	ADAMTS1	Q9UHI8	967 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	TLR6	Q9Y2C9	796 aa		12.02	□□□□□ -0.49
ERBB2-208	ENST00000578630	ANKRD62	A6NC57	917 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	TMCO5B	A8MYB1	307 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	PRR33	A8MZF0	331 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	SPECC1L-ADORA2A	F8WAN1	911 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	AP5Z1	O43299	807 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	DAB1	O75553	588 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	FTL	P02792	175 aa	Predicted RBP	12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	CYBB	P04839	570 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	KRT3	P12035	628 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	CORO1A	P31146	461 aa	Known RBP	12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	PREPL	Q4J6C6	727 aa	Predicted RBP	12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	C2CD6	Q53TS8	623 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	E4F1	Q66K89	784 aa	Predicted RBP	12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	RHBDF2	Q6PJF5	856 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	SND1	Q7KZF4	910 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	SUGP1	Q8IWZ8	645 aa	Known RBP	12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	MCOLN2	Q8IZK6	566 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	SYT11	Q9BT88	431 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	OSBPL6	Q9BZF3	934 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	DEF6	Q9H4E7	631 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	FAM204A	Q9H8W3	233 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	TBC1D17	Q9HA65	648 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	SPHK2	Q9NRA0	654 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	AGO1	Q9UL18	857 aa	Known RBP	12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	SIT1	Q9Y3P8	196 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	PAXBP1	Q9Y5B6	917 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	BDP1	A6H8Y1	2624 aa		12.01	□□□□□ -0.49
ERBB2-208	ENST00000578630	PATJ	Q8NI35	1801 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	NUP210	Q8TEM1	1887 aa	Predicted RBP	12	□□□□□ -0.49
ERBB2-208	ENST00000578630	FAM170A	A1A519	330 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	SIGLEC16	A6NMB1	481 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	FAM170B	A6NMN3	283 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630		M0QYT0	321 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	DDX3X	O00571	662 aa	Known RBP eCLIP	12	□□□□□ -0.49
ERBB2-208	ENST00000578630	SCAMP3	O14828	347 aa	Known RBP	12	□□□□□ -0.49
ERBB2-208	ENST00000578630	MSI1	O43347	362 aa	Known RBP	12	□□□□□ -0.49
ERBB2-208	ENST00000578630	GREM1	O60565	184 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	LATS1	O95835	1130 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	APOE	P02649	317 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	KLKB1	P03952	638 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	DES	P17661	470 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	ABCB4	P21439	1286 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	CCR1	P32246	355 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	CTH	P32929	405 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms