RNA–Protein interactions for RNA: ENST00000578593.1

DDX42-207, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 2,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-207ENST00000578593 HNRNPDQ14103 355 aaKnown RBP7.75□□□□□ -1.17
DDX42-207ENST00000578593 ZNF829Q3KNS6 432 aaPredicted RBP7.75□□□□□ -1.17
DDX42-207ENST00000578593 FAM26FQ5R3K3 315 aa7.75□□□□□ -1.17
DDX42-207ENST00000578593 TTC27Q6P3X3 843 aa7.75□□□□□ -1.17
DDX42-207ENST00000578593 AAGABQ6PD74 315 aa7.75□□□□□ -1.17
DDX42-207ENST00000578593 FOXR2Q6PJQ5 311 aa7.75□□□□□ -1.17
DDX42-207ENST00000578593 USP50Q70EL3 339 aaPredicted RBP7.75□□□□□ -1.17
DDX42-207ENST00000578593 MAMDC2Q7Z304 686 aaPredicted RBP7.75□□□□□ -1.17
DDX42-207ENST00000578593 NEK8Q86SG6 692 aa7.75□□□□□ -1.17
DDX42-207ENST00000578593 CDH26Q8IXH8 852 aa7.75□□□□□ -1.17
DDX42-207ENST00000578593 VPS33AQ96AX1 596 aa7.75□□□□□ -1.17
DDX42-207ENST00000578593 OMA1Q96E52 524 aa7.75□□□□□ -1.17
DDX42-207ENST00000578593 ZNF486Q96H40 463 aaPredicted RBP7.75□□□□□ -1.17
DDX42-207ENST00000578593 MAGEB18Q96M61 343 aa7.75□□□□□ -1.17
DDX42-207ENST00000578593 LRRC37BQ96QE4 947 aa7.75□□□□□ -1.17
DDX42-207ENST00000578593 BRIP1Q9BX63 1249 aa7.75□□□□□ -1.17
DDX42-207ENST00000578593 LIN7BQ9HAP6 207 aa7.75□□□□□ -1.17
DDX42-207ENST00000578593 PCDH12Q9NPG4 1184 aa7.75□□□□□ -1.17
DDX42-207ENST00000578593 INTS7Q9NVH2 962 aaKnown RBP7.75□□□□□ -1.17
DDX42-207ENST00000578593 BARHL2Q9NY43 387 aa7.75□□□□□ -1.17
DDX42-207ENST00000578593 DTLQ9NZJ0 730 aa7.75□□□□□ -1.17
DDX42-207ENST00000578593 MALT1Q9UDY8 824 aa7.75□□□□□ -1.17
DDX42-207ENST00000578593 TRMT112Q9UI30 125 aaKnown RBP7.75□□□□□ -1.17
DDX42-207ENST00000578593 PCDHGA10Q9Y5H3 936 aa7.75□□□□□ -1.17
DDX42-207ENST00000578593 PITPNM2Q9BZ72 1349 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 USP1O94782 785 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 CLPTM1O96005 669 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 KRT7P08729 469 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 KRT5P13647 590 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 PON1P27169 355 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 MARK3P27448 753 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 GSTM2P28161 218 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 NUDT1P36639 197 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 SRP54P61011 504 aaKnown RBP7.74□□□□□ -1.17
DDX42-207ENST00000578593 TFAP4Q01664 338 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 FOLH1Q04609 750 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 PPATQ06203 517 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 RRP1BQ14684 758 aaKnown RBP7.74□□□□□ -1.17
DDX42-207ENST00000578593 CHRNA2Q15822 529 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 SGCAQ16586 387 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 ALFQ53S48 1182 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 ACSBG2Q5FVE4 666 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 PLBD1Q6P4A8 553 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 RFWD3Q6PCD5 774 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 GJB7Q6PEY0 223 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 BNC2Q6ZN30 1099 aaPredicted RBP7.74□□□□□ -1.17
DDX42-207ENST00000578593 ZNF410Q86VK4 478 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 PRELID2Q8N945 189 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 GALNT11Q8NCW6 608 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 PNMA1Q8ND90 353 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 CABLES1Q8TDN4 633 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 TTC9Q92623 222 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 DNAJC19Q96DA6 116 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 RUNDC3BQ96NL0 473 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 CPVLQ9H3G5 476 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 EBF3Q9H4W6 596 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 PARP2Q9UGN5 583 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 STON1Q9Y6Q2 735 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 ITGB4P16144 1822 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 C1orf232A0A0U1RR37 186 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 ARHGEF35A5YM69 484 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 KPNA5O15131 536 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 CCDC22O60826 627 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 ADAM11O75078 769 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 EYA4O95677 639 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 ESRRBO95718 433 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 CYP2D6P10635 497 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 GFAPP14136 432 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 HPGDP15428 266 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 CDH2P19022 906 aaPredicted RBP7.74□□□□□ -1.17
DDX42-207ENST00000578593 GPD2P43304 727 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 YARSP54577 528 aaKnown RBP7.74□□□□□ -1.17
DDX42-207ENST00000578593 CACNB1Q02641 598 aaPredicted RBP7.74□□□□□ -1.17
DDX42-207ENST00000578593 MED21Q13503 144 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 SSPNQ14714 243 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 EFTUD2Q15029 972 aaKnown RBP eCLIP7.74□□□□□ -1.171e-6■■□□□ 11.7
DDX42-207ENST00000578593 EXOC3L4Q17RC7 722 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 POMZP3Q6PJE2 187 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 CCDC137Q6PK04 289 aaKnown RBP7.74□□□□□ -1.17
DDX42-207ENST00000578593 AGMOQ6ZNB7 445 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 KIAA2013Q8IYS2 634 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 LRRC47Q8N1G4 583 aaKnown RBP7.74□□□□□ -1.17
DDX42-207ENST00000578593 LNX1Q8TBB1 728 aaPredicted RBP7.74□□□□□ -1.17
DDX42-207ENST00000578593 DTX3LQ8TDB6 740 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 TBCKQ8TEA7 893 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 SNX29Q8TEQ0 813 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 RFFLQ8WZ73 363 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 TAMM41Q96BW9 452 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 SERPINB12Q96P63 405 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 PAIP1Q9H074 479 aaKnown RBP7.74□□□□□ -1.17
DDX42-207ENST00000578593 NT5C3AQ9H0P0 336 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 DPEP3Q9H4B8 488 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 NARFLQ9H6Q4 476 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 ATP13A2Q9NQ11 1180 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 FBXO40Q9UH90 709 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 VPS4AQ9UN37 437 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 PTPN22Q9Y2R2 807 aa7.74□□□□□ -1.17
DDX42-207ENST00000578593 RTCAO00442 366 aaKnown RBP7.73□□□□□ -1.17
DDX42-207ENST00000578593 PODXLO00592 558 aa7.73□□□□□ -1.17
DDX42-207ENST00000578593 SHOXO15266 292 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms