RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 PCDHA7Q9UN72 937 aa22.1■■□□□ 1.13
TSEN54-205ENST00000578415 LHX6Q9UPM6 363 aa22.1■■□□□ 1.13
TSEN54-205ENST00000578415 PCDHA5Q9Y5H7 936 aa22.1■■□□□ 1.13
TSEN54-205ENST00000578415 STON1Q9Y6Q2 735 aa22.1■■□□□ 1.13
TSEN54-205ENST00000578415 HLA-DRAP01903 254 aa22.09■■□□□ 1.13
TSEN54-205ENST00000578415 KLKB1P03952 638 aa22.09■■□□□ 1.13
TSEN54-205ENST00000578415 NR3C1P04150 777 aa22.09■■□□□ 1.13
TSEN54-205ENST00000578415 CD6P30203 668 aa22.09■■□□□ 1.13
TSEN54-205ENST00000578415 PIK3CAP42336 1068 aa22.09■■□□□ 1.13
TSEN54-205ENST00000578415 GRIK2Q13002 908 aa22.09■■□□□ 1.13
TSEN54-205ENST00000578415 TRIP6Q15654 476 aaKnown RBP22.09■■□□□ 1.13
TSEN54-205ENST00000578415 FOXD4L6Q3SYB3 417 aaPredicted RBP22.09■■□□□ 1.13
TSEN54-205ENST00000578415 C10orf120Q5SQS8 335 aa22.09■■□□□ 1.13
TSEN54-205ENST00000578415 SYCP2LQ5T4T6 812 aa22.09■■□□□ 1.13
TSEN54-205ENST00000578415 FOXD4L3Q6VB84 417 aaPredicted RBP22.09■■□□□ 1.13
TSEN54-205ENST00000578415 CYFIP2Q96F07 1278 aa22.09■■□□□ 1.13
TSEN54-205ENST00000578415 FAM13BQ9NYF5 915 aa22.09■■□□□ 1.13
TSEN54-205ENST00000578415 SLC27A6Q9Y2P4 619 aa22.09■■□□□ 1.13
TSEN54-205ENST00000578415 PENKP01210 267 aaPredicted RBP22.08■■□□□ 1.13
TSEN54-205ENST00000578415 KIF11P52732 1056 aa22.08■■□□□ 1.13
TSEN54-205ENST00000578415 MFAP3P55082 362 aa22.08■■□□□ 1.13
TSEN54-205ENST00000578415 WDR45BQ5MNZ6 344 aa22.08■■□□□ 1.13
TSEN54-205ENST00000578415 FYB2Q5VWT5 728 aa22.08■■□□□ 1.13
TSEN54-205ENST00000578415 METTL3Q86U44 580 aaKnown RBP22.08■■□□□ 1.13
TSEN54-205ENST00000578415 NAXDQ8IW45 347 aa22.08■■□□□ 1.13
TSEN54-205ENST00000578415 DNASE2BQ8WZ79 361 aa22.08■■□□□ 1.13
TSEN54-205ENST00000578415 TOE1Q96GM8 510 aaKnown RBP22.08■■□□□ 1.13
TSEN54-205ENST00000578415 MKRN2Q9H000 416 aaKnown RBP22.08■■□□□ 1.13
TSEN54-205ENST00000578415 APOBEC3GQ9HC16 384 aaKnown RBP22.08■■□□□ 1.13
TSEN54-205ENST00000578415 EXOC1Q9NV70 894 aa22.08■■□□□ 1.13
TSEN54-205ENST00000578415 WSB2Q9NYS7 404 aaPredicted RBP22.08■■□□□ 1.13
TSEN54-205ENST00000578415 USP36Q9P275 1121 aaKnown RBP22.08■■□□□ 1.13
TSEN54-205ENST00000578415 SERTAD1Q9UHV2 236 aa22.08■■□□□ 1.13
TSEN54-205ENST00000578415 NAGPAQ9UK23 515 aa22.08■■□□□ 1.13
TSEN54-205ENST00000578415 FREM2Q5SZK8 3169 aa22.08■■□□□ 1.12
TSEN54-205ENST00000578415 DSPP15924 2871 aaKnown RBP22.08■■□□□ 1.12
TSEN54-205ENST00000578415 PDXKO00764 312 aa22.07■■□□□ 1.12
TSEN54-205ENST00000578415 IKBKBO14920 756 aa22.07■■□□□ 1.12
TSEN54-205ENST00000578415 ACTN4O43707 911 aaKnown RBP22.07■■□□□ 1.12
TSEN54-205ENST00000578415 GNSP15586 552 aa22.07■■□□□ 1.12
TSEN54-205ENST00000578415 IL12RB1P42701 662 aa22.07■■□□□ 1.12
TSEN54-205ENST00000578415 ME1P48163 572 aa22.07■■□□□ 1.12
TSEN54-205ENST00000578415 ENPP2Q13822 863 aa22.07■■□□□ 1.12
TSEN54-205ENST00000578415 GEN1Q17RS7 908 aa22.07■■□□□ 1.12
TSEN54-205ENST00000578415 KMT5BQ4FZB7 885 aa22.07■■□□□ 1.12
TSEN54-205ENST00000578415 CCDC186Q7Z3E2 898 aa22.07■■□□□ 1.12
TSEN54-205ENST00000578415 PROSER1Q86XN7 944 aa22.07■■□□□ 1.12
TSEN54-205ENST00000578415 ZNF276Q8N554 614 aa22.07■■□□□ 1.12
TSEN54-205ENST00000578415 ADAMTS14Q8WXS8 1223 aa22.07■■□□□ 1.12
TSEN54-205ENST00000578415 NT5C1AQ9BXI3 368 aa22.07■■□□□ 1.12
TSEN54-205ENST00000578415 PRDM16Q9HAZ2 1276 aa22.07■■□□□ 1.12
TSEN54-205ENST00000578415 KCNJ18B7U540 433 aa22.06■■□□□ 1.12
TSEN54-205ENST00000578415 SLFN14P0C7P3 912 aa22.06■■□□□ 1.12
TSEN54-205ENST00000578415 FTH1P19P0C7X4 201 aa22.06■■□□□ 1.12
TSEN54-205ENST00000578415 STARD3Q14849 445 aa22.06■■□□□ 1.12
TSEN54-205ENST00000578415 CEP135Q66GS9 1140 aa22.06■■□□□ 1.12
TSEN54-205ENST00000578415 CEP57L1Q8IYX8 460 aa22.06■■□□□ 1.12
TSEN54-205ENST00000578415 PNPLA1Q8N8W4 532 aa22.06■■□□□ 1.12
TSEN54-205ENST00000578415 PAGE5Q96GU1 130 aa22.06■■□□□ 1.12
TSEN54-205ENST00000578415 GPR174Q9BXC1 333 aa22.06■■□□□ 1.12
TSEN54-205ENST00000578415 ITM2CQ9NQX7 267 aa22.06■■□□□ 1.12
TSEN54-205ENST00000578415 THAP10Q9P2Z0 257 aaPredicted RBP22.06■■□□□ 1.12
TSEN54-205ENST00000578415 NFE2L3Q9Y4A8 694 aa22.06■■□□□ 1.12
TSEN54-205ENST00000578415 USP3Q9Y6I4 520 aa22.06■■□□□ 1.12
TSEN54-205ENST00000578415 A0A1B0GTW7 788 aa22.05■■□□□ 1.12
TSEN54-205ENST00000578415 CILPO75339 1184 aa22.05■■□□□ 1.12
TSEN54-205ENST00000578415 NCAM1P13591 858 aa22.05■■□□□ 1.12
TSEN54-205ENST00000578415 TRIM21P19474 475 aaKnown RBP22.05■■□□□ 1.12
TSEN54-205ENST00000578415 PSEN1P49768 467 aa22.05■■□□□ 1.12
TSEN54-205ENST00000578415 SCAPQ12770 1279 aa22.05■■□□□ 1.12
TSEN54-205ENST00000578415 ZCCHC9Q8N567 271 aaKnown RBP22.05■■□□□ 1.12
TSEN54-205ENST00000578415 TAS1R2Q8TE23 839 aa22.05■■□□□ 1.12
TSEN54-205ENST00000578415 ZDHHC5Q9C0B5 715 aa22.05■■□□□ 1.12
TSEN54-205ENST00000578415 CYP3A43Q9HB55 503 aa22.05■■□□□ 1.12
TSEN54-205ENST00000578415 CLIC5Q9NZA1 410 aa22.05■■□□□ 1.12
TSEN54-205ENST00000578415 PCDHB9Q9Y5E1 797 aa22.05■■□□□ 1.12
TSEN54-205ENST00000578415 MEI4A8MW99 385 aa22.04■■□□□ 1.12
TSEN54-205ENST00000578415 NPC1O15118 1278 aa22.04■■□□□ 1.12
TSEN54-205ENST00000578415 CBFA2T3O75081 653 aa22.04■■□□□ 1.12
TSEN54-205ENST00000578415 TPMTP51580 245 aa22.04■■□□□ 1.12
TSEN54-205ENST00000578415 VAMP7P51809 220 aa22.04■■□□□ 1.12
TSEN54-205ENST00000578415 ZNF132P52740 706 aa22.04■■□□□ 1.12
TSEN54-205ENST00000578415 PPP1R26Q5T8A7 1209 aaPredicted RBP22.04■■□□□ 1.12
TSEN54-205ENST00000578415 TADA2BQ86TJ2 420 aa22.04■■□□□ 1.12
TSEN54-205ENST00000578415 CADM4Q8NFZ8 388 aa22.04■■□□□ 1.12
TSEN54-205ENST00000578415 PIWIL1Q96J94 861 aaKnown RBP22.04■■□□□ 1.12
TSEN54-205ENST00000578415 DUSP16Q9BY84 665 aa22.04■■□□□ 1.12
TSEN54-205ENST00000578415 NIF3L1Q9GZT8 377 aa22.04■■□□□ 1.12
TSEN54-205ENST00000578415 IL21RQ9HBE5 538 aa22.04■■□□□ 1.12
TSEN54-205ENST00000578415 RASAL2Q9UJF2 1139 aa22.04■■□□□ 1.12
TSEN54-205ENST00000578415 CLEC4EQ9ULY5 219 aa22.04■■□□□ 1.12
TSEN54-205ENST00000578415 ZNF510Q9Y2H8 683 aa22.04■■□□□ 1.12
TSEN54-205ENST00000578415 FRMD4BQ9Y2L6 1034 aa22.04■■□□□ 1.12
TSEN54-205ENST00000578415 ANKRD11Q6UB99 2663 aaPredicted RBP22.04■■□□□ 1.12
TSEN54-205ENST00000578415 TRIM49P0CI25 452 aa22.03■■□□□ 1.12
TSEN54-205ENST00000578415 TRIM49CP0CI26 452 aa22.03■■□□□ 1.12
TSEN54-205ENST00000578415 RALAP11233 206 aa22.03■■□□□ 1.12
TSEN54-205ENST00000578415 CD58P19256 250 aa22.03■■□□□ 1.12
TSEN54-205ENST00000578415 CORO1AP31146 461 aaKnown RBP22.03■■□□□ 1.12
TSEN54-205ENST00000578415 CHKAP35790 457 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms