RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 IRAK2O43187 625 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 MSI1O43347 362 aaKnown RBP13.65□□□□□ -0.22
CTC1-203ENST00000578240 CA3P07451 260 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 L1CAMP32004 1257 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 CXCR3P49682 368 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 CDH6P55285 790 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 RPL10AP62906 217 aaKnown RBP13.65□□□□□ -0.22
CTC1-203ENST00000578240 SMAD3P84022 425 aaKnown RBP13.65□□□□□ -0.22
CTC1-203ENST00000578240 SLC7A5Q01650 507 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 KRT17Q04695 432 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 SCAPQ12770 1279 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 TAF10Q12962 218 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 NME3Q13232 169 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 ERMARDQ5T6L9 678 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 ZNF697Q5TEC3 545 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 C8orf74Q6P047 294 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 MSANTD2Q6P1R3 559 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 TCEAL8Q8IYN2 117 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 SPPL3Q8TCT6 385 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 FAM118BQ9BPY3 351 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 PLVAPQ9BX97 442 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 PLEKHA4Q9H4M7 779 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.65□□□□□ -0.22
CTC1-203ENST00000578240 ABCC13Q9NSE7 274 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 DDIT4Q9NX09 232 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 COX16Q9P0S2 106 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 AMACRQ9UHK6 382 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 LZTS1Q9Y250 596 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 IRAK3Q9Y616 596 aa13.65□□□□□ -0.22
CTC1-203ENST00000578240 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.64□□□□□ -0.23
CTC1-203ENST00000578240 DYNC1I1O14576 645 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 RTN3O95197 1032 aaPredicted RBP13.64□□□□□ -0.23
CTC1-203ENST00000578240 YWHAQP27348 245 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 VSNL1P62760 191 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 DEUP1Q05D60 604 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 SEMA3BQ13214 749 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 CLUL1Q15846 466 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 BOLA3Q53S33 107 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 KAZNQ674X7 775 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 BBS12Q6ZW61 710 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 MON1AQ86VX9 555 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 GPR161Q8N6U8 529 aaKnown RBP13.64□□□□□ -0.23
CTC1-203ENST00000578240 PQLC3Q8N755 202 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 C1orf54Q8WWF1 131 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 FBXO32Q969P5 355 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 NTAN1Q96AB6 310 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 DCLK3Q9C098 648 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 SLITRK6Q9H5Y7 841 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 FAM204AQ9H8W3 233 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 CYP4F11Q9HBI6 524 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.64□□□□□ -0.23
CTC1-203ENST00000578240 MTUS1Q9ULD2 1270 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 INSL5Q9Y5Q6 135 aa13.64□□□□□ -0.23
CTC1-203ENST00000578240 GRM6O15303 877 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 TGM5O43548 720 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 CSPG5O95196 566 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 MYBL2P10244 700 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 H2AFXP16104 143 aaPredicted RBP13.63□□□□□ -0.23
CTC1-203ENST00000578240 PECAM1P16284 738 aaPredicted RBP13.63□□□□□ -0.23
CTC1-203ENST00000578240 IRS1P35568 1242 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 PBX2P40425 430 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 PTGIRP43119 386 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 ZFYVE27Q5T4F4 411 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 BTBD8Q5XKL5 378 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 LILRA6Q6PI73 481 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 FBXO38Q6PIJ6 1188 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 VSIG1Q86XK7 387 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 KCTD6Q8NC69 237 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 POF1BQ8WVV4 589 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 CEP295NLQ96MC4 621 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 KLHL5Q96PQ7 755 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 NCAPGQ9BPX3 1015 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 TCF25Q9BQ70 676 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 HINFPQ9BQA5 517 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 CALN1Q9BXU9 219 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 PARD6BQ9BYG5 372 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 LRRC19Q9H756 370 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.63□□□□□ -0.23
CTC1-203ENST00000578240 RRN3Q9NYV6 651 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 STK39Q9UEW8 545 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 SFMBT1Q9UHJ3 866 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 FBXW11Q9UKB1 542 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 RAB21Q9UL25 225 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 NEU3Q9UQ49 428 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 EFR3BQ9Y2G0 817 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.63□□□□□ -0.23
CTC1-203ENST00000578240 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.63□□□□□ -0.23
CTC1-203ENST00000578240 TARSL2A2RTX5 802 aaKnown RBP13.63□□□□□ -0.23
CTC1-203ENST00000578240 C2orf71A6NGG8 1288 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 ZNF487B1APH4 448 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 FAM72CH0Y354 149 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 TTI1O43156 1089 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 ZMYND10O75800 440 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 SPATA31D3P0C874 917 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 KCNJ1P48048 391 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 TUFMP49411 452 aaKnown RBP13.63□□□□□ -0.23
CTC1-203ENST00000578240 CREMQ03060 361 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 PDK2Q15119 407 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 FAM72AQ5TYM5 149 aa13.63□□□□□ -0.23
CTC1-203ENST00000578240 PLPP4Q5VZY2 271 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms