RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 SERPINC1P01008 464 aa20.18■□□□□ 0.82
SS18-208ENST00000577751 GLI1P08151 1106 aa20.18■□□□□ 0.82
SS18-208ENST00000577751 MMEP08473 750 aa20.18■□□□□ 0.82
SS18-208ENST00000577751 NCAM1P13591 858 aa20.18■□□□□ 0.82
SS18-208ENST00000577751 CORO1AP31146 461 aaKnown RBP20.18■□□□□ 0.82
SS18-208ENST00000577751 FANCCQ00597 558 aa20.18■□□□□ 0.82
SS18-208ENST00000577751 MTAPQ13126 283 aa20.18■□□□□ 0.82
SS18-208ENST00000577751 ANGPT1Q15389 498 aa20.18■□□□□ 0.82
SS18-208ENST00000577751 PTPN20Q4JDL3 420 aa20.18■□□□□ 0.82
SS18-208ENST00000577751 TAF3Q5VWG9 929 aa20.18■□□□□ 0.82
SS18-208ENST00000577751 EZH1Q92800 747 aaPredicted RBP20.18■□□□□ 0.82
SS18-208ENST00000577751 PIWIL1Q96J94 861 aaKnown RBP20.18■□□□□ 0.82
SS18-208ENST00000577751 TRIM62Q9BVG3 475 aa20.18■□□□□ 0.82
SS18-208ENST00000577751 IRF2BPLQ9H1B7 796 aa20.18■□□□□ 0.82
SS18-208ENST00000577751 PDCL3Q9H2J4 239 aa20.18■□□□□ 0.82
SS18-208ENST00000577751 SPATA6Q9NWH7 488 aaPredicted RBP20.18■□□□□ 0.82
SS18-208ENST00000577751 ASNSD1Q9NWL6 643 aa20.18■□□□□ 0.82
SS18-208ENST00000577751 MARK1Q9P0L2 795 aa20.18■□□□□ 0.82
SS18-208ENST00000577751 AGO1Q9UL18 857 aaKnown RBP20.18■□□□□ 0.82
SS18-208ENST00000577751 NAALADL1Q9UQQ1 740 aa20.18■□□□□ 0.82
SS18-208ENST00000577751 KIAA1549LQ6ZVL6 1849 aa20.18■□□□□ 0.82
SS18-208ENST00000577751 H0Y858 1186 aa20.17■□□□□ 0.82
SS18-208ENST00000577751 GOLGA6L19H0YKK7 550 aa20.17■□□□□ 0.82
SS18-208ENST00000577751 EGFP01133 1207 aa20.17■□□□□ 0.82
SS18-208ENST00000577751 IGLV3-27P01718 113 aa20.17■□□□□ 0.82
SS18-208ENST00000577751 ERBB2P04626 1255 aa20.17■□□□□ 0.82
SS18-208ENST00000577751 CHRNB2P17787 502 aa20.17■□□□□ 0.82
SS18-208ENST00000577751 GABRB2P47870 512 aa20.17■□□□□ 0.82
SS18-208ENST00000577751 SNX16P57768 344 aa20.17■□□□□ 0.82
SS18-208ENST00000577751 YWHAZP63104 245 aaKnown RBP20.17■□□□□ 0.82
SS18-208ENST00000577751 CDR2Q01850 454 aa20.17■□□□□ 0.82
SS18-208ENST00000577751 SYPL2Q5VXT5 272 aa20.17■□□□□ 0.82
SS18-208ENST00000577751 C12orf40Q86WS4 652 aa20.17■□□□□ 0.82
SS18-208ENST00000577751 ETFBKMTQ8IXQ9 262 aa20.17■□□□□ 0.82
SS18-208ENST00000577751 FAM217AQ8IXS0 508 aa20.17■□□□□ 0.82
SS18-208ENST00000577751 SLC20A1Q8WUM9 679 aa20.17■□□□□ 0.82
SS18-208ENST00000577751 FAM149B1Q96BN6 582 aa20.17■□□□□ 0.82
SS18-208ENST00000577751 POPDC2Q9HBU9 364 aa20.17■□□□□ 0.82
SS18-208ENST00000577751 A0A0A0MRY4 1105 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 MSI1O43347 362 aaKnown RBP20.16■□□□□ 0.82
SS18-208ENST00000577751 CYP1A1P04798 512 aaPredicted RBP20.16■□□□□ 0.82
SS18-208ENST00000577751 CHKAP35790 457 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 SLC6A11P48066 632 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 NOMO3P69849 1222 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 FMO1Q01740 532 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 RING1Q06587 406 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 TAF5Q15542 800 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 FBXO43Q4G163 708 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 EFHC1Q5JVL4 640 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 LRSAM1Q6UWE0 723 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 OLFML1Q6UWY5 402 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 Q6ZS52 159 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 FAM183BPQ6ZVS7 135 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 CACNA2D4Q7Z3S7 1137 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 ZDHHC17Q8IUH5 632 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 DENND1CQ8IV53 801 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 CPXM2Q8N436 756 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 SPEM1Q8N4L4 309 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 DQX1Q8TE96 717 aaKnown RBP20.16■□□□□ 0.82
SS18-208ENST00000577751 BAP1Q92560 729 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 STOML2Q9UJZ1 356 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 MYO6Q9UM54 1294 aa20.16■□□□□ 0.82
SS18-208ENST00000577751 LAMTOR5O43504 91 aa20.15■□□□□ 0.82
SS18-208ENST00000577751 IGLV3-25P01717 112 aa20.15■□□□□ 0.82
SS18-208ENST00000577751 HARS2P49590 506 aaKnown RBP20.15■□□□□ 0.82
SS18-208ENST00000577751 SLC6A3Q01959 620 aa20.15■□□□□ 0.82
SS18-208ENST00000577751 NHLH1Q02575 133 aa20.15■□□□□ 0.82
SS18-208ENST00000577751 MESP2Q0VG99 397 aa20.15■□□□□ 0.82
SS18-208ENST00000577751 NNTQ13423 1086 aa20.15■□□□□ 0.82
SS18-208ENST00000577751 EIF4EBP2Q13542 120 aaPredicted RBP20.15■□□□□ 0.82
SS18-208ENST00000577751 OR6B2Q6IFH4 312 aa20.15■□□□□ 0.82
SS18-208ENST00000577751 PHTF2Q8N3S3 785 aa20.15■□□□□ 0.82
SS18-208ENST00000577751 ZNF397Q8NF99 534 aaPredicted RBP20.15■□□□□ 0.82
SS18-208ENST00000577751 IPO4Q8TEX9 1081 aaKnown RBP20.15■□□□□ 0.82
SS18-208ENST00000577751 C18orf8Q96DM3 657 aa20.15■□□□□ 0.82
SS18-208ENST00000577751 P2RY11Q96G91 374 aa20.15■□□□□ 0.82
SS18-208ENST00000577751 SLC2A13Q96QE2 648 aa20.15■□□□□ 0.82
SS18-208ENST00000577751 PNKPQ96T60 521 aa20.15■□□□□ 0.82
SS18-208ENST00000577751 TTYH3Q9C0H2 523 aa20.15■□□□□ 0.82
SS18-208ENST00000577751 PRMT8Q9NR22 394 aaPredicted RBP20.15■□□□□ 0.82
SS18-208ENST00000577751 WDR35Q9P2L0 1181 aa20.15■□□□□ 0.82
SS18-208ENST00000577751 FBXO4Q9UKT5 387 aa20.15■□□□□ 0.82
SS18-208ENST00000577751 K7EQS6 105 aa20.14■□□□□ 0.81
SS18-208ENST00000577751 CAPN9O14815 690 aa20.14■□□□□ 0.81
SS18-208ENST00000577751 CACNG3O60359 315 aa20.14■□□□□ 0.81
SS18-208ENST00000577751 HSF2BPO75031 334 aa20.14■□□□□ 0.81
SS18-208ENST00000577751 TULP3O75386 442 aa20.14■□□□□ 0.81
SS18-208ENST00000577751 LATS1O95835 1130 aa20.14■□□□□ 0.81
SS18-208ENST00000577751 PBX1P40424 430 aa20.14■□□□□ 0.81
SS18-208ENST00000577751 UBASH3AP57075 661 aa20.14■□□□□ 0.81
SS18-208ENST00000577751 ANO4Q32M45 955 aa20.14■□□□□ 0.81
SS18-208ENST00000577751 FIGNQ5HY92 759 aa20.14■□□□□ 0.81
SS18-208ENST00000577751 TPGS1Q6ZTW0 290 aa20.14■□□□□ 0.81
SS18-208ENST00000577751 TOGARAM2Q6ZUX3 1019 aa20.14■□□□□ 0.81
SS18-208ENST00000577751 SLC26A9Q7LBE3 791 aa20.14■□□□□ 0.81
SS18-208ENST00000577751 IRF2BP2Q7Z5L9 587 aa20.14■□□□□ 0.81
SS18-208ENST00000577751 ERICH1Q86X53 443 aa20.14■□□□□ 0.81
SS18-208ENST00000577751 AZIN2Q96A70 460 aa20.14■□□□□ 0.81
SS18-208ENST00000577751 SLC39A13Q96H72 371 aa20.14■□□□□ 0.81
SS18-208ENST00000577751 SERPINB11Q96P15 392 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms