RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 LINC00597Q9H2U6 94 aa13.27□□□□□ -0.29
CDK5RAP3-203ENST00000577442 LTB4R2Q9NPC1 389 aa13.27□□□□□ -0.29
CDK5RAP3-203ENST00000577442 TMEM51Q9NW97 253 aa13.27□□□□□ -0.29
CDK5RAP3-203ENST00000577442 RRN3Q9NYV6 651 aa13.27□□□□□ -0.29
CDK5RAP3-203ENST00000577442 TJP2Q9UDY2 1190 aa13.27□□□□□ -0.29
CDK5RAP3-203ENST00000577442 CAPN11Q9UMQ6 739 aa13.27□□□□□ -0.29
CDK5RAP3-203ENST00000577442 BZW2Q9Y6E2 419 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP3-203ENST00000577442 SCAMP3O14828 347 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 DAB1O75553 588 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 LATS1O95835 1130 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 CYP17A1P05093 508 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 CALB1P05937 261 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 HMBSP08397 361 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 TNFAIP3P21580 790 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 MMP8P22894 467 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 CORO1AP31146 461 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 CDK17Q00537 523 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 RING1Q06587 406 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 KLHL30Q0D2K2 578 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 LRRC32Q14392 662 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 DHCR24Q15392 516 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 IER5LQ5T953 404 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 FAM102AQ5T9C2 384 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 Q6ZNB5 142 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 IRF2BP2Q7Z5L9 587 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 VPS36Q86VN1 386 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 XYLT1Q86Y38 959 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 VSTM4Q8IW00 320 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 UNC45BQ8IWX7 931 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 BBS7Q8IWZ6 715 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 PJA1Q8NG27 643 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 TTC8Q8TAM2 541 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 CPA5Q8WXQ8 436 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 SLC2A13Q96QE2 648 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 TRIM5Q9C035 493 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 FAM204AQ9H8W3 233 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 CACNA1IQ9P0X4 2223 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 WDR35Q9P2L0 1181 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 STAP1Q9ULZ2 295 aa13.26□□□□□ -0.29
CDK5RAP3-203ENST00000577442 MSI1O43347 362 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 GREM1O60565 184 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 GYPCP04921 128 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 ADH5P11766 374 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 UNGP13051 313 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 TARSP26639 723 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 GBP1P32455 592 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 GJA4P35212 333 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 CHKAP35790 457 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 SOX9P48436 509 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 NUBP1P53384 320 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 TBX4P57082 545 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 GAD2Q05329 585 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 TDRD12Q587J7 1177 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 DCAF6Q58WW2 860 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 LY6G5CQ5SRR4 150 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 MMS22LQ6ZRQ5 1243 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 TAC4Q86UU9 113 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 PHF13Q86YI8 300 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 WBP2Q969T9 261 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 PIWIL1Q96J94 861 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 PCDHB18PQ96TA0 734 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 C11orf70Q9BRQ4 267 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 FOXQ1Q9C009 403 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 HAUS4Q9H6D7 363 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 SPHK2Q9NRA0 654 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 ADAM22Q9P0K1 906 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 SFMBT1Q9UHJ3 866 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 NDRG2Q9UN36 371 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 NAALADL1Q9UQQ1 740 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 TLR6Q9Y2C9 796 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 SIT1Q9Y3P8 196 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 KMT2EQ8IZD2 1858 aa13.25□□□□□ -0.29
CDK5RAP3-203ENST00000577442 COL4A3Q01955 1670 aa13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 FAM170BA6NMN3 283 aa13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 GOLGA8SH3BPF8 625 aa13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 TRDMT1O14717 391 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 IRAK2O43187 625 aa13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 HOXC11O43248 304 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 TRUB2O95900 331 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 IGLV3-27P01718 113 aa13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 APOEP02649 317 aa13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 SERPING1P05155 500 aa13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 FYNP06241 537 aa13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 SLC2A3P11169 496 aa13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 CASP14P31944 242 aa13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 NOS2P35228 1153 aa13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 EIF2DP41214 584 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 SLC11A2P49281 568 aa13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 GSCP56915 257 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 GRSF1Q12849 480 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 MTA1Q13330 715 aa13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 TSR1Q2NL82 804 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 PREPLQ4J6C6 727 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 DGKKQ5KSL6 1271 aa13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 E4F1Q66K89 784 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 ARCQ7LC44 396 aa13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 DENND1CQ8IV53 801 aa13.24□□□□□ -0.29
CDK5RAP3-203ENST00000577442 CCDC105Q8IYK2 499 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms