RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 TWNKQ96RR1 684 aa12.43□□□□□ -0.42
CDH8-202ENST00000577228 NT5C1AQ9BXI3 368 aa12.43□□□□□ -0.42
CDH8-202ENST00000577228 IMPG2Q9BZV3 1241 aa12.43□□□□□ -0.42
CDH8-202ENST00000577228 NAGPAQ9UK23 515 aa12.43□□□□□ -0.42
CDH8-202ENST00000577228 STON1Q9Y6Q2 735 aa12.43□□□□□ -0.42
CDH8-202ENST00000577228 ATRXP46100 2492 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 MEI4A8MW99 385 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 WASH3PC4AMC7 463 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 ACTN4O43707 911 aaKnown RBP12.42□□□□□ -0.42
CDH8-202ENST00000577228 SH3BP5O60239 455 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 STC2O76061 302 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 KIF20AO95235 890 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 F13A1P00488 732 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 ZSCAN22P10073 491 aaPredicted RBP12.42□□□□□ -0.42
CDH8-202ENST00000577228 RALAP11233 206 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 CD58P19256 250 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 CD6P30203 668 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 PSEN1P49768 467 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 SLC14A1Q13336 389 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 C1orf220Q5T0J3 134 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 CCDC186Q7Z3E2 898 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 RAB44Q7Z6P3 723 aaPredicted RBP12.42□□□□□ -0.42
CDH8-202ENST00000577228 SCD5Q86SK9 330 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 SPRYD3Q8NCJ5 442 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 PAGE5Q96GU1 130 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 CAMK1GQ96NX5 476 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 DNAI2Q9GZS0 605 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 NIF3L1Q9GZT8 377 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 CYP3A43Q9HB55 503 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 APOBEC3GQ9HC16 384 aaKnown RBP12.42□□□□□ -0.42
CDH8-202ENST00000577228 FBXO10Q9UK96 956 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 ZNF510Q9Y2H8 683 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 SLC27A6Q9Y2P4 619 aa12.42□□□□□ -0.42
CDH8-202ENST00000577228 AKAP13Q12802 2813 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 NPC1O15118 1278 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 CALUO43852 315 aaPredicted RBP12.41□□□□□ -0.42
CDH8-202ENST00000577228 CILPO75339 1184 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 GJB3O75712 270 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 PENKP01210 267 aaPredicted RBP12.41□□□□□ -0.42
CDH8-202ENST00000577228 PDIA4P13667 645 aaKnown RBP12.41□□□□□ -0.42
CDH8-202ENST00000577228 MAOBP27338 520 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 CORO1AP31146 461 aaKnown RBP12.41□□□□□ -0.42
CDH8-202ENST00000577228 VAMP7P51809 220 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 KIF11P52732 1056 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 MFAP3P55082 362 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 GRIK2Q13002 908 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 TRIP6Q15654 476 aaKnown RBP12.41□□□□□ -0.42
CDH8-202ENST00000577228 FUT11Q495W5 492 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 ATL3Q6DD88 541 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 NAXDQ8IW45 347 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 UCMAQ8WVF2 138 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 TOE1Q96GM8 510 aaKnown RBP12.41□□□□□ -0.42
CDH8-202ENST00000577228 CDK5RAP1Q96SZ6 601 aaKnown RBP12.41□□□□□ -0.42
CDH8-202ENST00000577228 ZDHHC5Q9C0B5 715 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 PRDM16Q9HAZ2 1276 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 CLIC5Q9NZA1 410 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 USP36Q9P275 1121 aaKnown RBP12.41□□□□□ -0.42
CDH8-202ENST00000577228 THAP10Q9P2Z0 257 aaPredicted RBP12.41□□□□□ -0.42
CDH8-202ENST00000577228 RASAL2Q9UJF2 1139 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 LHX6Q9UPM6 363 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 PCDHB9Q9Y5E1 797 aa12.41□□□□□ -0.42
CDH8-202ENST00000577228 A0A1B0GTW7 788 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 FAM221BA6H8Z2 402 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 SYNCRIPO60506 623 aaKnown RBP12.4□□□□□ -0.42
CDH8-202ENST00000577228 KLKB1P03952 638 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 HMBSP08397 361 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 TRIM49P0CI25 452 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 TRIM49CP0CI26 452 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 NCAM1P13591 858 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 HOXB3P14651 431 aaPredicted RBP12.4□□□□□ -0.42
CDH8-202ENST00000577228 CHKAP35790 457 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 IL12RB1P42701 662 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 GCLMP48507 274 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 ZNF132P52740 706 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 COG7P83436 770 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 RING1Q06587 406 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 EFEMP1Q12805 493 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 COL9A2Q14055 689 aaPredicted RBP12.4□□□□□ -0.42
CDH8-202ENST00000577228 GEN1Q17RS7 908 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 FYB2Q5VWT5 728 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 METTL3Q86U44 580 aaKnown RBP12.4□□□□□ -0.42
CDH8-202ENST00000577228 ZNF276Q8N554 614 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 CCDC150Q8NCX0 1101 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 TAS1R2Q8TE23 839 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 P2RY11Q96G91 374 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 GPR174Q9BXC1 333 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 DUSP16Q9BY84 665 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 DCLK3Q9C098 648 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 MIR1-1HGQ9H1L0 117 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 WSB2Q9NYS7 404 aaPredicted RBP12.4□□□□□ -0.42
CDH8-202ENST00000577228 CFAP45Q9UL16 551 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 TRAF3IP3Q9Y228 551 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 NFE2L3Q9Y4A8 694 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 USP3Q9Y6I4 520 aa12.4□□□□□ -0.42
CDH8-202ENST00000577228 MAPK13O15264 365 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 CYBBP04839 570 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 HSP90AA1P07900 732 aaKnown RBP12.39□□□□□ -0.43
CDH8-202ENST00000577228 FTH1P19P0C7X4 201 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 KRT13P13646 458 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 NR2F2P24468 414 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms