RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 SLC39A7Q92504 469 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 PRCCQ92733 491 aaPredicted RBP10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 SMARCD1Q96GM5 515 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 NUP58Q9BVL2 599 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 NMUR1Q9HB89 426 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 KIAA1586Q9HCI6 787 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 TLR8Q9NR97 1041 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 KRT82Q9NSB4 513 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 LSM7Q9UK45 103 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 CLEC4EQ9ULY5 219 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 PCDHGB2Q9Y5G2 931 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 SNX11Q9Y5W9 270 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 ATP8B3O60423 1300 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 PLK4O00444 970 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 TNFSF14O43557 240 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 SYNCRIPO60506 623 aaKnown RBP10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 PHACTR2O75167 634 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 C1QL1O75973 258 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 STAU1O95793 577 aaKnown RBP10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 KLKB1P03952 638 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 RARGP13631 454 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 ATICP31939 592 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 TXLNAP40222 546 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 PLA2G4AP47712 749 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 CYP2J2P51589 502 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 CLDN6P56747 220 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 CYP24A1Q07973 514 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 SMAD1Q15797 465 aaKnown RBP10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 PTPRNQ16849 979 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 SCARA5Q6ZMJ2 495 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 Q6ZNB5 142 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 GPRIN1Q7Z2K8 1008 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 PDCD7Q8N8D1 485 aaKnown RBP10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 C12orf29Q8N999 325 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 ZNF507Q8TCN5 953 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 PLEKHO2Q8TD55 490 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 SORCS1Q8WY21 1168 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 SNX19Q92543 992 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 SYAP1Q96A49 352 aaPredicted RBP10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 JAKMIP2Q96AA8 810 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 UBL7Q96S82 380 aaPredicted RBP10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 FBXO44Q9H4M3 255 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 C6orf106Q9H6K1 298 aaPredicted RBP10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 CYLDQ9NQC7 956 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 AGPAT3Q9NRZ7 376 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 RAI2Q9Y5P3 530 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 KNTC1P50748 2209 aa10.66□□□□□ -0.7
NPLOC4-220ENST00000576940 A0A1W2PQH9 124 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 CYP26A1O43174 497 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 STC2O76061 302 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 CLSTN1O94985 981 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 EPHX1P07099 455 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 ACADMP11310 421 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 HLA-EP13747 358 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 PRKCHP24723 683 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 ACSL1P33121 698 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 ABCG1P45844 678 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 IL9RQ01113 521 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 GOLGA8FQ08AF8 430 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 GOLGA8DPQ0D2H9 430 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 ENPP2Q13822 863 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 ZNF234Q14588 700 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 NUMA1Q14980 2115 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 KCNT1Q5JUK3 1230 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 PRAMEF14Q5SWL7 426 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 FYB2Q5VWT5 728 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 LAYNQ6UX15 382 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 STXBP4Q6ZWJ1 553 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 EPM2AIP1Q7L775 607 aaPredicted RBP10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 NELFCDQ8IXH7 590 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 XXYLT1Q8NBI6 393 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 TNIP3Q96KP6 325 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 CSNK1G1Q9HCP0 422 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 ELOVL2Q9NXB9 296 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 HMGXB4Q9UGU5 601 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 ANKRD6Q9Y2G4 727 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 SLC27A6Q9Y2P4 619 aa10.65□□□□□ -0.7
NPLOC4-220ENST00000576940 ASH1LQ9NR48 2969 aaKnown RBP10.65□□□□□ -0.71
NPLOC4-220ENST00000576940 TMEM131Q92545 1883 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 VPS37CA5D8V6 355 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 HHLA1C9JL84 531 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 H0Y8X5 98 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 PENKP01210 267 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 IGLV3-19P01714 112 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 C4BPAP04003 597 aaKnown RBP10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 HMBSP08397 361 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 ADORA2BP29275 332 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 AFF3P51826 1226 aaKnown RBP10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 ZNF132P52740 706 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 NDST1P52848 882 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 BIRC3Q13489 604 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 RABEP1Q15276 862 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 ZNF699Q32M78 642 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 ZNF667Q5HYK9 610 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 C10orf120Q5SQS8 335 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 TMEM215Q68D42 235 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 SCD5Q86SK9 330 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 CRYBG2Q8N1P7 616 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms