RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 ACADSBP45954 432 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 POLR2FP61218 127 aaKnown RBP13.86□□□□□ -0.19
RPAIN-216ENST00000575599 COG7P83436 770 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 CSTF1Q05048 431 aaKnown RBP13.86□□□□□ -0.19
RPAIN-216ENST00000575599 GAS6Q14393 721 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 GAB4Q2WGN9 574 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 TSSK4Q6SA08 328 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 C12orf40Q86WS4 652 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 FMNL3Q8IVF7 1028 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 SCUBE3Q8IX30 993 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 MAML2Q8IZL2 1156 aaPredicted RBP13.86□□□□□ -0.19
RPAIN-216ENST00000575599 C1orf131Q8NDD1 294 aaKnown RBP13.86□□□□□ -0.19
RPAIN-216ENST00000575599 FAM149B1Q96BN6 582 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 PHOX2BQ99453 314 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 IER2Q9BTL4 223 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 STK33Q9BYT3 514 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 PDCL3Q9H2J4 239 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 NLRC4Q9NPP4 1024 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 SPHK2Q9NRA0 654 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 IFNKQ9P0W0 207 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 SFMBT1Q9UHJ3 866 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 PCDHGC3Q9UN70 934 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 MYOFQ9NZM1 2061 aa13.86□□□□□ -0.19
RPAIN-216ENST00000575599 FAM170AA1A519 330 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 EPHB6O15197 1021 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 MSI1O43347 362 aaKnown RBP13.85□□□□□ -0.19
RPAIN-216ENST00000575599 RNF40O75150 1001 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 SP9P0CG40 484 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 CYP11B1P15538 503 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 SLC6A11P48066 632 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 RPL34P49207 117 aaKnown RBP13.85□□□□□ -0.19
RPAIN-216ENST00000575599 BPIFB4P59827 614 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 GAD2Q05329 585 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 KDSRQ06136 332 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 TAF3Q5VWG9 929 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 SARM1Q6SZW1 724 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 TPGS1Q6ZTW0 290 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 APTXQ7Z2E3 356 aaKnown RBP13.85□□□□□ -0.19
RPAIN-216ENST00000575599 TMEM25Q86YD3 366 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 DENND1CQ8IV53 801 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 DRC7Q8IY82 874 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 NAT16Q8N8M0 369 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 NEK11Q8NG66 645 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 STK32AQ8WU08 396 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 SLC4A5Q9BY07 1137 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 TJP2Q9UDY2 1190 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 SIK3Q9Y2K2 1263 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 CEP83Q9Y592 693 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 CACNA1IQ9P0X4 2223 aa13.85□□□□□ -0.19
RPAIN-216ENST00000575599 NEDD8-MDP1E9PL57 170 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 PAPSS1O43252 624 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-216ENST00000575599 SART1O43290 800 aaKnown RBP13.84□□□□□ -0.19
RPAIN-216ENST00000575599 GFPT2O94808 682 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 ADCY5O95622 1261 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 KLKB1P03952 638 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 NCAM1P13591 858 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 CCR3P51677 355 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 SATB1Q01826 763 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 SMYD5Q6GMV2 418 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 Q6ZNB5 142 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 SYNPOQ8N3V7 929 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 SPEM1Q8N4L4 309 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 WDTC1Q8N5D0 677 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 EZH1Q92800 747 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-216ENST00000575599 BHMTQ93088 406 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 PLD4Q96BZ4 506 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 PPP1R13BQ96KQ4 1090 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 NOX5Q96PH1 765 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 SPAG5Q96R06 1193 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 CPXM1Q96SM3 734 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 BBS2Q9BXC9 721 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 DCLK3Q9C098 648 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 LHX5Q9H2C1 402 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 PRMT8Q9NR22 394 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-216ENST00000575599 FBXO4Q9UKT5 387 aa13.84□□□□□ -0.19
RPAIN-216ENST00000575599 LRRC10BA6NIK2 292 aa13.83□□□□□ -0.19
RPAIN-216ENST00000575599 CAPN9O14815 690 aa13.83□□□□□ -0.19
RPAIN-216ENST00000575599 HOXC11O43248 304 aaPredicted RBP13.83□□□□□ -0.19
RPAIN-216ENST00000575599 CXCL12P48061 93 aa13.83□□□□□ -0.19
RPAIN-216ENST00000575599 ZNF75DP51815 510 aa13.83□□□□□ -0.19
RPAIN-216ENST00000575599 SEC13P55735 322 aa13.83□□□□□ -0.19
RPAIN-216ENST00000575599 PPP2R5DQ14738 602 aa13.83□□□□□ -0.19
RPAIN-216ENST00000575599 MSANTD2Q6P1R3 559 aa13.83□□□□□ -0.19
RPAIN-216ENST00000575599 PKN3Q6P5Z2 889 aa13.83□□□□□ -0.19
RPAIN-216ENST00000575599 TMEM110Q86TL2 294 aa13.83□□□□□ -0.19
RPAIN-216ENST00000575599 NOP9Q86U38 636 aaKnown RBP13.83□□□□□ -0.19
RPAIN-216ENST00000575599 IPO4Q8TEX9 1081 aaKnown RBP13.83□□□□□ -0.19
RPAIN-216ENST00000575599 PIWIL1Q96J94 861 aaKnown RBP13.83□□□□□ -0.19
RPAIN-216ENST00000575599 ERGIC2Q96RQ1 377 aa13.83□□□□□ -0.19
RPAIN-216ENST00000575599 PNKPQ96T60 521 aa13.83□□□□□ -0.19
RPAIN-216ENST00000575599 XPO4Q9C0E2 1151 aaKnown RBP13.83□□□□□ -0.19
RPAIN-216ENST00000575599 SYNCQ9H7C4 482 aa13.83□□□□□ -0.19
RPAIN-216ENST00000575599 ARHGEF4Q9NR80 690 aa13.83□□□□□ -0.19
RPAIN-216ENST00000575599 C2orf42Q9NWW7 574 aa13.83□□□□□ -0.19
RPAIN-216ENST00000575599 AGO1Q9UL18 857 aaKnown RBP13.83□□□□□ -0.19
RPAIN-216ENST00000575599 NAALADL1Q9UQQ1 740 aa13.83□□□□□ -0.19
RPAIN-216ENST00000575599 ZNF510Q9Y2H8 683 aa13.83□□□□□ -0.19
RPAIN-216ENST00000575599 HBS1LQ9Y450 684 aaKnown RBP13.83□□□□□ -0.19
RPAIN-216ENST00000575599 R4GN57 208 aa13.83□□□□□ -0.19
RPAIN-216ENST00000575599 KIAA1549LQ6ZVL6 1849 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms