RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 HMGB4Q8WW32 186 aa11.87□□□□□ -0.51
RPAIN-214ENST00000574003 UBXN6Q9BZV1 441 aa11.87□□□□□ -0.51
RPAIN-214ENST00000574003 DNAI2Q9GZS0 605 aa11.87□□□□□ -0.51
RPAIN-214ENST00000574003 SLC6A17Q9H1V8 727 aa11.87□□□□□ -0.51
RPAIN-214ENST00000574003 HESX1Q9UBX0 185 aa11.87□□□□□ -0.51
RPAIN-214ENST00000574003 AGO1Q9UL18 857 aaKnown RBP11.87□□□□□ -0.51
RPAIN-214ENST00000574003 RAD54BQ9Y620 910 aa11.87□□□□□ -0.51
RPAIN-214ENST00000574003 NUP205Q92621 2012 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 TCRBV21S2A2A0A5A6 115 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 WASH3PC4AMC7 463 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 PMM2O15305 246 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 CACNG3O60359 315 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 TSPAN3O60637 253 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 KRT5P13647 590 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 PPP1R2P41236 205 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 PSEN1P49768 467 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 ZNF132P52740 706 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 GOLGA8FQ08AF8 430 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 GOLGA8DPQ0D2H9 430 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 CSRP2Q16527 193 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 BSPRYQ5W0U4 402 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 KIAA1211LQ6NV74 962 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 LCLAT1Q6UWP7 414 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 IRF2BP1Q8IU81 584 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 FMNL3Q8IVF7 1028 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 GPR161Q8N6U8 529 aaKnown RBP11.86□□□□□ -0.51
RPAIN-214ENST00000574003 SLC35F5Q8WV83 523 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 CNOT6LQ96LI5 555 aaKnown RBP11.86□□□□□ -0.51
RPAIN-214ENST00000574003 IPO9Q96P70 1041 aaKnown RBP11.86□□□□□ -0.51
RPAIN-214ENST00000574003 UBE2TQ9NPD8 197 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-214ENST00000574003 CD93Q9NPY3 652 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 MARK1Q9P0L2 795 aa11.86□□□□□ -0.51
RPAIN-214ENST00000574003 BCCIPQ9P287 314 aaKnown RBP eCLIP11.86□□□□□ -0.51
RPAIN-214ENST00000574003 CDV3Q9UKY7 258 aaKnown RBP11.86□□□□□ -0.51
RPAIN-214ENST00000574003 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.86□□□□□ -0.51
RPAIN-214ENST00000574003 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.86□□□□□ -0.51
RPAIN-214ENST00000574003 P4HA2O15460 535 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 PAEPP09466 180 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 SLC9A1P19634 815 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 DGKGP49619 791 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 MARSP56192 900 aaKnown RBP11.85□□□□□ -0.51
RPAIN-214ENST00000574003 SLC8A3P57103 927 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 DAOAP59103 153 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 COG7P83436 770 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 CREB5Q02930 508 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 CNGA2Q16280 664 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 GEN1Q17RS7 908 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 HSP90AA4PQ58FG1 418 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 EOGTQ5NDL2 527 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 FYB2Q5VWT5 728 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 DENND1BQ6P3S1 775 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 ARMCX6Q7L4S7 300 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 TADA2BQ86TJ2 420 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 SIX6OS1Q8N1H7 587 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 PGBD3Q8N328 593 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 ARHGAP18Q8N392 663 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 ZNF276Q8N554 614 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 DEFB119Q8N690 84 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 ZC3H10Q96K80 434 aaKnown RBP11.85□□□□□ -0.51
RPAIN-214ENST00000574003 XPO6Q96QU8 1125 aaKnown RBP11.85□□□□□ -0.51
RPAIN-214ENST00000574003 MIS12Q9H081 205 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 FAM124BQ9H5Z6 455 aaPredicted RBP11.85□□□□□ -0.51
RPAIN-214ENST00000574003 CACNA2D2Q9NY47 1150 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 WDR35Q9P2L0 1181 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 MBD1Q9UIS9 605 aaPredicted RBP11.85□□□□□ -0.51
RPAIN-214ENST00000574003 RWDD2AQ9UIY3 292 aa11.85□□□□□ -0.51
RPAIN-214ENST00000574003 AJAP1Q9UKB5 411 aaPredicted RBP11.85□□□□□ -0.51
RPAIN-214ENST00000574003 PI4KAP42356 2102 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 A0A1W2PQF6 199 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 FAM170AA1A519 330 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 PRR5-ARHGAP8B1AHC4 643 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 PATE3B3GLJ2 98 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 GNA14O95837 355 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 SETSIPP0DME0 302 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 HOXB2P14652 356 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 GABRG2P18507 467 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 MPLP40238 635 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 DHPSP49366 369 aaPredicted RBP11.84□□□□□ -0.51
RPAIN-214ENST00000574003 SGSHP51688 502 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 ARHGAP8P85298 464 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 CETN1Q12798 172 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 ARHGAP44Q17R89 818 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 AASDHQ4L235 1098 aaPredicted RBP11.84□□□□□ -0.51
RPAIN-214ENST00000574003 USP39Q53GS9 565 aaKnown RBP11.84□□□□□ -0.51
RPAIN-214ENST00000574003 FOXR2Q6PJQ5 311 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 ERMP1Q7Z2K6 904 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 TRIML1Q8N9V2 468 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 CCDC26Q8TAB7 109 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 OLIG1Q8TAK6 271 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 SORCS1Q8WY21 1168 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 KCTD13Q8WZ19 329 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 CLSTN2Q9H4D0 955 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 POLMQ9NP87 494 aaPredicted RBP11.84□□□□□ -0.51
RPAIN-214ENST00000574003 TJP2Q9UDY2 1190 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 CYTH4Q9UIA0 394 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 KIAA1257Q9ULG3 409 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 STRIP2Q9ULQ0 834 aa11.84□□□□□ -0.51
RPAIN-214ENST00000574003 TPRP12270 2363 aaKnown RBP11.83□□□□□ -0.52
RPAIN-214ENST00000574003 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.83□□□□□ -0.52
RPAIN-214ENST00000574003 GOLGA6L7A0A1B0GV03 622 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms