RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 TNK2Q07912 1038 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 TRIP4Q15650 581 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 NUGGCQ68CJ6 796 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 TRIM68Q6AZZ1 485 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 MMS22LQ6ZRQ5 1243 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 GAS2L3Q86XJ1 694 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 XYLT1Q86Y38 959 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 PHF13Q86YI8 300 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 CNGA4Q8IV77 575 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 ADGRG2Q8IZP9 1017 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 OR8K1Q8NGG5 319 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 SLC30A5Q8TAD4 765 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 RIN3Q8TB24 985 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 C11orf70Q9BRQ4 267 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 HPS4Q9NQG7 708 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 TJP2Q9UDY2 1190 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 SFMBT1Q9UHJ3 866 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 NAALADL1Q9UQQ1 740 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 TLR6Q9Y2C9 796 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 COL4A2P08572 1712 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 MYOFQ9NZM1 2061 aa13.32□□□□□ -0.28
TRAPPC1-206ENST00000573989 F5P12259 2224 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 ANKRD62A6NC57 917 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 SPECC1L-ADORA2AF8WAN1 911 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 DAB1O75553 588 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 GRAP2O75791 330 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 LATS1O95835 1130 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 SLC2A3P11169 496 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 GZMAP12544 262 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 ARSAP15289 507 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 DESP17661 470 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 CORO1AP31146 461 aaKnown RBP13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 NOS2P35228 1153 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 MATKP42679 507 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 TBX4P57082 545 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 RNASE9P60153 205 aaKnown RBP13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 C1QBPQ07021 282 aaKnown RBP13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 MTA1Q13330 715 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 PREPLQ4J6C6 727 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 ACAD10Q6JQN1 1059 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 SND1Q7KZF4 910 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 ARCQ7LC44 396 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 TMC6Q7Z403 805 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 BBS7Q8IWZ6 715 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 DRC7Q8IY82 874 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 DEFB106AQ8N104 65 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 FBXL6Q8N531 539 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 FLCNQ8NFG4 579 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 TTC8Q8TAM2 541 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 DQX1Q8TE96 717 aaKnown RBP13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 FAM3CQ92520 227 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 MRFAP1L1Q96HT8 127 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 VCPIP1Q96JH7 1222 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 SLC2A13Q96QE2 648 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 PCDHB18PQ96TA0 734 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 LINC00597Q9H2U6 94 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 FAM204AQ9H8W3 233 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 TBC1D17Q9HA65 648 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 SLC12A6Q9UHW9 1150 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 PAXBP1Q9Y5B6 917 aa13.31□□□□□ -0.28
TRAPPC1-206ENST00000573989 TRIOO75962 3097 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 FAM86C2PA6NEL3 165 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 GOLGA8SH3BPF8 625 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 TRUB2O95900 331 aaKnown RBP13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 APOEP02649 317 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 FYNP06241 537 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 SKILP12757 684 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 CTHP32929 405 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 SLC11A2P49281 568 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 CLCN5P51795 746 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 GSCP56915 257 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 GAD2Q05329 585 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 UBXN2BQ14CS0 331 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 DHCR24Q15392 516 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 SYPL2Q5VXT5 272 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 ASTLQ6HA08 431 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 Q6ZNB5 142 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 ZNF571Q7Z3V5 609 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 DENND1CQ8IV53 801 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 RNF34Q969K3 372 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 TRIM11Q96F44 468 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 PIWIL1Q96J94 861 aaKnown RBP13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 DDX50Q9BQ39 737 aaKnown RBP13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 SYT11Q9BT88 431 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 DDX23Q9BUQ8 820 aaKnown RBP13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 SELENOOQ9BVL4 669 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 OSBPL6Q9BZF3 934 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 SPHK2Q9NRA0 654 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 SIT1Q9Y3P8 196 aa13.3□□□□□ -0.28
TRAPPC1-206ENST00000573989 TMCO5BA8MYB1 307 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 AKR1B15C9JRZ8 316 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 SCAMP3O14828 347 aaKnown RBP13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 IRAK2O43187 625 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 MSI1O43347 362 aaKnown RBP13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 RTN2O75298 545 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 F9P00740 461 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 CYBBP04839 570 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 CYP17A1P05093 508 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms