RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 PCDHB4Q9Y5E5 795 aa18.14■□□□□ 0.49
SMG6-212ENST00000573153 MUC22E2RYF6 1773 aaPredicted RBP18.14■□□□□ 0.49
SMG6-212ENST00000573153 TNRC6BQ9UPQ9 1833 aaKnown RBP18.14■□□□□ 0.49
SMG6-212ENST00000573153 BECN2A8MW95 431 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 FYNP06241 537 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 RALAP11233 206 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 CORO1AP31146 461 aaKnown RBP18.13■□□□□ 0.49
SMG6-212ENST00000573153 STILQ15468 1287 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 EGFLAMQ63HQ2 1017 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 ANO7Q6IWH7 933 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 GJB7Q6PEY0 223 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 PRR23CQ6ZRP0 262 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 CEP68Q76N32 757 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 CACNA2D4Q7Z3S7 1137 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 ARHGAP18Q8N392 663 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 FRMD1Q8N878 549 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 BBS2Q9BXC9 721 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 ACP6Q9NPH0 428 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 DNAJC17Q9NVM6 304 aaKnown RBP18.13■□□□□ 0.49
SMG6-212ENST00000573153 MARCH2Q9P0N8 246 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 HESX1Q9UBX0 185 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 CYTH4Q9UIA0 394 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 STOML2Q9UJZ1 356 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 LSM7Q9UK45 103 aaKnown RBP18.13■□□□□ 0.49
SMG6-212ENST00000573153 SDK1Q7Z5N4 2213 aa18.13■□□□□ 0.49
SMG6-212ENST00000573153 GTPBP10A4D1E9 387 aaKnown RBP18.12■□□□□ 0.49
SMG6-212ENST00000573153 GDF9O60383 454 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 IGLV3-27P01718 113 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 ERCC5P28715 1186 aaPredicted RBP18.12■□□□□ 0.49
SMG6-212ENST00000573153 GPD2P43304 727 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 RGS7P49802 495 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 ATXN1P54253 815 aaKnown RBP18.12■□□□□ 0.49
SMG6-212ENST00000573153 COG7P83436 770 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 LMNB2Q03252 620 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 GOLGA8FQ08AF8 430 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 GOLGA8DPQ0D2H9 430 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 CT47A1Q5JQC4 288 aaPredicted RBP18.12■□□□□ 0.49
SMG6-212ENST00000573153 C10orf76Q5T2E6 689 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 BSPRYQ5W0U4 402 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 PMS2CLQ68D20 193 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 RNF43Q68DV7 783 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 GRAMD4Q6IC98 578 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 MSANTD2Q6P1R3 559 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 TRIM65Q6PJ69 517 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 ERMP1Q7Z2K6 904 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 KCNV2Q8TDN2 545 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 NUP62CLQ9H1M0 184 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 SIX2Q9NPC8 291 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 CNGB3Q9NQW8 809 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 PLK2Q9NYY3 685 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 USP18Q9UMW8 372 aa18.12■□□□□ 0.49
SMG6-212ENST00000573153 ABCA7Q8IZY2 2146 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 SLC12A8A0AV02 714 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 MED19A0JLT2 244 aaPredicted RBP18.11■□□□□ 0.49
SMG6-212ENST00000573153 HMBSP08397 361 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 SLC9A1P19634 815 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 P2RY2P41231 377 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 DGKEP52429 567 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 PUM1Q14671 1186 aaKnown RBP eCLIP18.11■□□□□ 0.49
SMG6-212ENST00000573153 CCDC6Q16204 474 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 MEA1Q16626 185 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 MAP7D1Q3KQU3 841 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 DPCR1Q3MIW9 517 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 CPXM2Q8N436 756 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 ZNF513Q8N8E2 541 aaPredicted RBP18.11■□□□□ 0.49
SMG6-212ENST00000573153 EDEM1Q92611 657 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 PIWIL1Q96J94 861 aaKnown RBP18.11■□□□□ 0.49
SMG6-212ENST00000573153 FAM81BQ96LP2 452 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 ARRDC1-AS1Q9H2J1 176 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 SMOC1Q9H4F8 434 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 THAP9Q9H5L6 903 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 LRRC4Q9HBW1 653 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 WDR35Q9P2L0 1181 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 SFMBT1Q9UHJ3 866 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 MBD1Q9UIS9 605 aaPredicted RBP18.11■□□□□ 0.49
SMG6-212ENST00000573153 INVSQ9Y283 1065 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 SLC27A6Q9Y2P4 619 aa18.11■□□□□ 0.49
SMG6-212ENST00000573153 LAMA1P25391 3075 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 TBC1D3BA6NDS4 549 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 M0QYV0 167 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 PIK3R2O00459 728 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 MSI1O43347 362 aaKnown RBP18.1■□□□□ 0.49
SMG6-212ENST00000573153 MFAP3P55082 362 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 ENPP2Q13822 863 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 SF3A2Q15428 464 aaKnown RBP18.1■□□□□ 0.49
SMG6-212ENST00000573153 GEN1Q17RS7 908 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 EOGTQ5NDL2 527 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 BTBD8Q5XKL5 378 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 KIAA1211LQ6NV74 962 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 DENND1BQ6P3S1 775 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 ENOSF1Q7L5Y1 443 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 DENND1CQ8IV53 801 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 FMNL3Q8IVF7 1028 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 BHMTQ93088 406 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 PLD4Q96BZ4 506 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 GABRG3Q99928 467 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 PCDHGA5Q9Y5G8 931 aa18.1■□□□□ 0.49
SMG6-212ENST00000573153 PRR5-ARHGAP8B1AHC4 643 aa18.09■□□□□ 0.49
SMG6-212ENST00000573153 ZNF806P0C7X5 589 aa18.09■□□□□ 0.49
SMG6-212ENST00000573153 LCP1P13796 627 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms