RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 NCAM1P13591 858 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 CTHP32929 405 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 PRKCQQ04759 706 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 RUNX3Q13761 415 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 ASIC2Q16515 512 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 FIGNQ5HY92 759 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 MSANTD2Q6P1R3 559 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 OLFML1Q6UWY5 402 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 FMNL3Q8IVF7 1028 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 CPA6Q8N4T0 437 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 CHFRQ96EP1 664 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 PCDHB18PQ96TA0 734 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 RBSNQ9H1K0 784 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 STRIP2Q9ULQ0 834 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 NAALADL1Q9UQQ1 740 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 SPECC1L-ADORA2AF8WAN1 911 aa16.51■□□□□ 0.23
CHD3-215ENST00000572750 STK25O00506 426 aa16.51■□□□□ 0.23
CHD3-215ENST00000572750 GRAP2O75791 330 aa16.51■□□□□ 0.23
CHD3-215ENST00000572750 NFATC1O95644 943 aa16.51■□□□□ 0.23
CHD3-215ENST00000572750 CYP1A1P04798 512 aaPredicted RBP16.51■□□□□ 0.23
CHD3-215ENST00000572750 CYP17A1P05093 508 aa16.51■□□□□ 0.23
CHD3-215ENST00000572750 STARD6P59095 220 aa16.51■□□□□ 0.23
CHD3-215ENST00000572750 SFMBT2Q5VUG0 894 aa16.51■□□□□ 0.23
CHD3-215ENST00000572750 NAIF1Q69YI7 327 aaPredicted RBP16.51■□□□□ 0.23
CHD3-215ENST00000572750 ASTLQ6HA08 431 aaPredicted RBP16.51■□□□□ 0.23
CHD3-215ENST00000572750 OR6B2Q6IFH4 312 aa16.51■□□□□ 0.23
CHD3-215ENST00000572750 TXNDC11Q6PKC3 985 aa16.51■□□□□ 0.23
CHD3-215ENST00000572750 TOGARAM2Q6ZUX3 1019 aa16.51■□□□□ 0.23
CHD3-215ENST00000572750 IRF2BP2Q7Z5L9 587 aa16.51■□□□□ 0.23
CHD3-215ENST00000572750 GAS2L3Q86XJ1 694 aa16.51■□□□□ 0.23
CHD3-215ENST00000572750 KIAA2013Q8IYS2 634 aa16.51■□□□□ 0.23
CHD3-215ENST00000572750 OLIG1Q8TAK6 271 aa16.51■□□□□ 0.23
CHD3-215ENST00000572750 SHDQ96IW2 340 aa16.51■□□□□ 0.23
CHD3-215ENST00000572750 DDX23Q9BUQ8 820 aaKnown RBP16.51■□□□□ 0.23
CHD3-215ENST00000572750 ECT2Q9H8V3 914 aa16.51■□□□□ 0.23
CHD3-215ENST00000572750 POPDC2Q9HBU9 364 aa16.51■□□□□ 0.23
CHD3-215ENST00000572750 LSM7Q9UK45 103 aaKnown RBP16.51■□□□□ 0.23
CHD3-215ENST00000572750 MYOFQ9NZM1 2061 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 F5P12259 2224 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 ITIH6Q6UXX5 1313 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 A0A1W2PQJ5 194 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 KANSL1LA0AUZ9 987 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 SLC9A3R1O14745 358 aaPredicted RBP16.5■□□□□ 0.23
CHD3-215ENST00000572750 CAPN9O14815 690 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 AP5Z1O43299 807 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 TARSP26639 723 aaKnown RBP16.5■□□□□ 0.23
CHD3-215ENST00000572750 CORO1AP31146 461 aaKnown RBP16.5■□□□□ 0.23
CHD3-215ENST00000572750 UBXN2BQ14CS0 331 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 CLEC16AQ2KHT3 1053 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 SYPL2Q5VXT5 272 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 ZNF852Q6ZMS4 543 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 TRIM72Q6ZMU5 477 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 Q6ZNB5 142 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 MMS22LQ6ZRQ5 1243 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 TAC4Q86UU9 113 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 ERICH1Q86X53 443 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 XYLT1Q86Y38 959 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 MSANTD4Q8NCY6 345 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 PJA1Q8NG27 643 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 SLC30A5Q8TAD4 765 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 ADAM32Q8TC27 787 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 DQX1Q8TE96 717 aaKnown RBP16.5■□□□□ 0.23
CHD3-215ENST00000572750 CPLX3Q8WVH0 158 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 AGPAT1Q99943 283 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 C11orf70Q9BRQ4 267 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 SYT11Q9BT88 431 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 NUP58Q9BVL2 599 aa16.5■□□□□ 0.23
CHD3-215ENST00000572750 C8orf33Q9H7E9 229 aaPredicted RBP16.5■□□□□ 0.23
CHD3-215ENST00000572750 NDRG2Q9UN36 371 aaKnown RBP16.5■□□□□ 0.23
CHD3-215ENST00000572750 MTF2Q9Y483 593 aaPredicted RBP16.5■□□□□ 0.23
CHD3-215ENST00000572750 PI15O43692 258 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 HSF2BPO75031 334 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 KLKB1P03952 638 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 CCDC172P0C7W6 258 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 GJA4P35212 333 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 GABRB2P47870 512 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 SNX16P57768 344 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 YWHAZP63104 245 aaKnown RBP16.49■□□□□ 0.23
CHD3-215ENST00000572750 PITX1P78337 314 aaPredicted RBP16.49■□□□□ 0.23
CHD3-215ENST00000572750 COG7P83436 770 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 CENPCQ03188 943 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 FAM102AQ5T9C2 384 aaPredicted RBP16.49■□□□□ 0.23
CHD3-215ENST00000572750 HTR3DQ70Z44 454 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 SLC26A9Q7LBE3 791 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 RALGPS2Q86X27 583 aaPredicted RBP16.49■□□□□ 0.23
CHD3-215ENST00000572750 CCDC105Q8IYK2 499 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 KIAA1958Q8N8K9 716 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 FAM3CQ92520 227 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 PLD4Q96BZ4 506 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 C18orf8Q96DM3 657 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 TRIM62Q9BVG3 475 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 EDEM3Q9BZQ6 932 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 HAUS4Q9H6D7 363 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 LTB4R2Q9NPC1 389 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 DLL3Q9NYJ7 618 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 TBC1D14Q9P2M4 693 aa16.49■□□□□ 0.23
CHD3-215ENST00000572750 HBS1LQ9Y450 684 aaKnown RBP16.49■□□□□ 0.23
CHD3-215ENST00000572750 ANKRD11Q6UB99 2663 aaPredicted RBP16.49■□□□□ 0.23
CHD3-215ENST00000572750 GOLGA8SH3BPF8 625 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 DAB1O75553 588 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms