RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 ST13P5Q8NFI4 369 aaPredicted RBP9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 ATXN2LQ8WWM7 1075 aaKnown RBP9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 RFFLQ8WZ73 363 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 CFAP57Q96MR6 1250 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 ASB16Q96NS5 453 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 KIF9Q9HAQ2 790 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 ZFP14Q9HCL3 533 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 TDP1Q9NUW8 608 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 CFAP97Q9P2B7 532 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 IP6K2Q9UHH9 426 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 LSM7Q9UK45 103 aaKnown RBP9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 TFR2Q9UP52 801 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 REXO2Q9Y3B8 237 aaKnown RBP9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 HBS1LQ9Y450 684 aaKnown RBP9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 TCRBV5S1A1TA0A578 114 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 TMEM191CA6NGB0 347 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 TMEM110-MUSTN1A8MSY1 372 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 C2CD4DB7Z1M9 353 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 LEFTY2O00292 366 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 PRAMEF12O95522 483 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 F9P00740 461 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 APOEP02649 317 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 VIPR2P41587 438 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 SSR1P43307 286 aaKnown RBP9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 HARS2P49590 506 aaKnown RBP9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 ZNF143P52747 638 aaPredicted RBP9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 TBX4P57082 545 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 DEUP1Q05D60 604 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 TRIP4Q15650 581 aaPredicted RBP9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 C15orf59Q2T9L4 293 aaPredicted RBP9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 CCDC14Q49A88 953 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 YAF2Q8IY57 180 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 SLC35G2Q8TBE7 412 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 SH3RF2Q8TEC5 729 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 FAM172AQ8WUF8 416 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 KHSRPQ92945 711 aaKnown RBP eCLIP9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 USP13Q92995 863 aaPredicted RBP9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 E2F7Q96AV8 911 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 PLD4Q96BZ4 506 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 TRIM44Q96DX7 344 aaPredicted RBP9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 TBCBQ99426 244 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 NPY6RQ99463 290 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 CNPY3Q9BT09 278 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 DDX23Q9BUQ8 820 aaKnown RBP9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 TSGA10Q9BZW7 698 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 KCNF1Q9H3M0 494 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 GKN1Q9NS71 199 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 EPS15L1Q9UBC2 864 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 SLC12A6Q9UHW9 1150 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 LCMT1Q9UIC8 334 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 CCL26Q9Y258 94 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 PAXBP1Q9Y5B6 917 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 ADGRG1Q9Y653 693 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 PLXNA3P51805 1871 aa9.84□□□□□ -0.83
NPLOC4-208ENST00000572351 PRRC2BQ5JSZ5 2229 aaKnown RBP9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 MACROD2A1Z1Q3 448 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 HEPACAM2A8MVW5 462 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 SCAMP3O14828 347 aaKnown RBP9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 IRAK2O43187 625 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 CCP110O43303 1012 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 ZSCAN12O43309 604 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 RNF8O76064 485 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 MOCS2O96007 188 aaPredicted RBP9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 SLC2A3P11169 496 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 WEE1P30291 646 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 CCR1P32246 355 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 PTPN9P43378 593 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 PITX1P78337 314 aaPredicted RBP9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 OGDHQ02218 1023 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 NNTQ13423 1086 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 PIGHQ14442 188 aaPredicted RBP9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 IFI16Q16666 785 aaKnown RBP9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 ARL13BQ3SXY8 428 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 ARHGAP29Q52LW3 1261 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 ZC3H12AQ5D1E8 599 aaKnown RBP9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 NUGGCQ68CJ6 796 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 TANGO2Q6ICL3 276 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 TRNP1Q6NT89 227 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 SCYL2Q6P3W7 929 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 PARM1Q6UWI2 310 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 ADHFE1Q8IWW8 467 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 UNC45BQ8IWX7 931 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 ZDHHC14Q8IZN3 488 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 BPIFB1Q8TDL5 484 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 FNIP1Q8TF40 1166 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 ELSPBP1Q96BH3 223 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 BTBD6Q96KE9 485 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 ASB2Q96Q27 587 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 KXD1Q9BQD3 176 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 KLF16Q9BXK1 252 aaPredicted RBP9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 TRIM7Q9C029 511 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 OSGEPQ9NPF4 335 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 TMEM51Q9NW97 253 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 THG1LQ9NWX6 298 aaKnown RBP9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 PRKAG3Q9UGI9 489 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 LIMD1Q9UGP4 676 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 TLR6Q9Y2C9 796 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 NUMBLQ9Y6R0 609 aa9.83□□□□□ -0.84
NPLOC4-208ENST00000572351 A0A0A6YYK5 440 aaPredicted RBP9.82□□□□□ -0.84
NPLOC4-208ENST00000572351 RCCD1A6NED2 376 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms