RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 NEDD8-MDP1E9PL57 170 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 MED7O43513 233 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 HRO43593 1189 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 GFRA3O60609 400 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 LILRB5O75023 590 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 KAT7O95251 611 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 ADH1CP00326 375 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 LTFP02788 710 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 CISD3P0C7P0 127 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 HNRNPLP14866 589 aaKnown RBP eCLIP10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 PITX1P78337 314 aaPredicted RBP10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 PTK2Q05397 1052 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 GOLGA8FQ08AF8 430 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 GOLGA8DPQ0D2H9 430 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 C2orf27AQ580R0 203 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 SYPL2Q5VXT5 272 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 HEATR6Q6AI08 1181 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 MSANTD2Q6P1R3 559 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 TOGARAM2Q6ZUX3 1019 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 TADA2BQ86TJ2 420 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 CCDC33Q8N5R6 958 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 C1orf131Q8NDD1 294 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 USP33Q8TEY7 942 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 STK32AQ8WU08 396 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 RNF139Q8WU17 664 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 IRGQQ8WZA9 623 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 DDX1Q92499 740 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 CPXM1Q96SM3 734 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 IER2Q9BTL4 223 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 BBS2Q9BXC9 721 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 ARHGEF4Q9NR80 690 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 ZSCAN32Q9NX65 697 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 LSM7Q9UK45 103 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 CLEC4EQ9ULY5 219 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 PCDHGC3Q9UN70 934 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 WDR87Q6ZQQ6 2873 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 GOLGA6L7A0A1B0GV03 622 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 LRRC10BA6NIK2 292 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 TEX33O43247 280 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 FBXO21O94952 628 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 PAPSS2O95340 614 aaPredicted RBP10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 ERBB2P04626 1255 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 APODP05090 189 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 NCAM1P13591 858 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 TYRP14679 529 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 CYP11B1P15538 503 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 TIE1P35590 1138 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 KIR2DL1P43626 348 aaPredicted RBP10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 ACADSBP45954 432 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 POLR2FP61218 127 aaKnown RBP10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 PDCLQ13371 301 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 SYCP1Q15431 976 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 FBXO43Q4G163 708 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 TAF3Q5VWG9 929 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 FYB2Q5VWT5 728 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 NOP9Q86U38 636 aaKnown RBP10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 SUMF1Q8NBK3 374 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 ADAM32Q8TC27 787 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 NKD2Q969F2 451 aaPredicted RBP10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 HHIPQ96QV1 700 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 CDK5RAP1Q96SZ6 601 aaKnown RBP10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 STK33Q9BYT3 514 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 LHX5Q9H2C1 402 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 NLRC4Q9NPP4 1024 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 FAM207AQ9NSI2 230 aaPredicted RBP10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 OLA1Q9NTK5 396 aaKnown RBP10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 MARK1Q9P0L2 795 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 STRIP2Q9ULQ0 834 aa10.69□□□□□ -0.7
GTF3C1-213ENST00000571886 SYCE3A1L190 88 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 LGALS16A8MUM7 142 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 PRRT4C9JH25 899 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 F8VZ95 297 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 GFRA2O00451 464 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 CACNG3O60359 315 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 TSPAN3O60637 253 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 GRAP2O75791 330 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 IGLV3-27P01718 113 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 MMEP08473 750 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 CDK11BP21127 795 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 KRT9P35527 623 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 EIF2DP41214 584 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 GRIA2P42262 883 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 SGSHP51688 502 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 JAM2P57087 298 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 DMC1Q14565 340 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 IQCB1Q15051 598 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 MEA1Q16626 185 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 KLHL40Q2TBA0 621 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 PTPN20Q4JDL3 420 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 C2CD6Q53TS8 623 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 TMEM92Q6UXU6 159 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 FAM183BPQ6ZVS7 135 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 FAM217AQ8IXS0 508 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 DCLK2Q8N568 766 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 ALLCQ8N6M5 410 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 IL17RCQ8NAC3 791 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 DQX1Q8TE96 717 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 SLC20A1Q8WUM9 679 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 ATRIPQ8WXE1 791 aa10.68□□□□□ -0.7
GTF3C1-213ENST00000571886 FAM149B1Q96BN6 582 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms