RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 FANCLQ9NW38 375 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 SFMBT1Q9UHJ3 866 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 AGO1Q9UL18 857 aaKnown RBP13.63□□□□□ -0.23
CNOT1-220ENST00000569916 ZNF510Q9Y2H8 683 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 FHOD1Q9Y613 1164 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 E5RJQ4 531 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 TRIM24O15164 1050 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 MSI1O43347 362 aaKnown RBP13.62□□□□□ -0.23
CNOT1-220ENST00000569916 TYRP14679 529 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 CLCN1P35523 988 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 GRIA2P42262 883 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 ACADSBP45954 432 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 TYRO3Q06418 890 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 PDCLQ13371 301 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 DMC1Q14565 340 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 C2orf27AQ580R0 203 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 KLHDC7AQ5VTJ3 777 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 HEATR6Q6AI08 1181 aaKnown RBP13.62□□□□□ -0.23
CNOT1-220ENST00000569916 WDR5BQ86VZ2 330 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 LONP2Q86WA8 852 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 FAM217AQ8IXS0 508 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 FAM71AQ8IYT1 594 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 TERB1Q8NA31 727 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 CCDC26Q8TAB7 109 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 LSM14BQ9BX40 385 aaKnown RBP13.62□□□□□ -0.23
CNOT1-220ENST00000569916 NAA15Q9BXJ9 866 aaKnown RBP13.62□□□□□ -0.23
CNOT1-220ENST00000569916 VPS16Q9H269 839 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 DNAJC17Q9NVM6 304 aaKnown RBP13.62□□□□□ -0.23
CNOT1-220ENST00000569916 WDR35Q9P2L0 1181 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 DEC1Q9P2X7 70 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 PCDHGC3Q9UN70 934 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 SLC8A2Q9UPR5 921 aa13.62□□□□□ -0.23
CNOT1-220ENST00000569916 HBS1LQ9Y450 684 aaKnown RBP13.62□□□□□ -0.23
CNOT1-220ENST00000569916 PAPSS1O43252 624 aaPredicted RBP13.61□□□□□ -0.23
CNOT1-220ENST00000569916 PENKP01210 267 aaPredicted RBP13.61□□□□□ -0.23
CNOT1-220ENST00000569916 IGLV3-27P01718 113 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 FYNP06241 537 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 UCHL3P15374 230 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 CHKAP35790 457 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 KIR2DL1P43626 348 aaPredicted RBP13.61□□□□□ -0.23
CNOT1-220ENST00000569916 PXNP49023 591 aaPredicted RBP13.61□□□□□ -0.23
CNOT1-220ENST00000569916 MRPS21P82921 87 aaKnown RBP13.61□□□□□ -0.23
CNOT1-220ENST00000569916 PTK2Q05397 1052 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 RAPGEF1Q13905 1077 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 DRAP1Q14919 205 aaPredicted RBP13.61□□□□□ -0.23
CNOT1-220ENST00000569916 NCAPHQ15003 741 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 FYB2Q5VWT5 728 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 TMEM110Q86TL2 294 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 SLC47A2Q86VL8 602 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 DENND1CQ8IV53 801 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 PASD1Q8IV76 773 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 SCUBE3Q8IX30 993 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 CPXM2Q8N436 756 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 WDTC1Q8N5D0 677 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 CAMKK1Q8N5S9 505 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 GOLGA1Q92805 767 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 XPO6Q96QU8 1125 aaKnown RBP13.61□□□□□ -0.23
CNOT1-220ENST00000569916 HHIPQ96QV1 700 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 GANQ9H2C0 597 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 HSD3B7Q9H2F3 369 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 PLCB1Q9NQ66 1216 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 PLK2Q9NYY3 685 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 TJP2Q9UDY2 1190 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 MMP17Q9ULZ9 603 aa13.61□□□□□ -0.23
CNOT1-220ENST00000569916 SMG5Q9UPR3 1016 aaKnown RBP13.61□□□□□ -0.23
CNOT1-220ENST00000569916 CCDC163A0A0D9SF12 145 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 SART1O43290 800 aaKnown RBP13.6□□□□□ -0.23
CNOT1-220ENST00000569916 HRO43593 1189 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 NCAM1P13591 858 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 ZNF18P17022 549 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 TIE1P35590 1138 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 TNFRSF4P43489 277 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 KLK7P49862 253 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 COPB1P53618 953 aaKnown RBP13.6□□□□□ -0.23
CNOT1-220ENST00000569916 SRSF5Q13243 272 aaKnown RBP13.6□□□□□ -0.23
CNOT1-220ENST00000569916 PREPLQ4J6C6 727 aaPredicted RBP13.6□□□□□ -0.23
CNOT1-220ENST00000569916 C10orf76Q5T2E6 689 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 EMC10Q5UCC4 262 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 GRAMD4Q6IC98 578 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 CAVIN1Q6NZI2 390 aaKnown RBP13.6□□□□□ -0.23
CNOT1-220ENST00000569916 BEND5Q7L4P6 421 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 CCDC33Q8N5R6 958 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 ALLCQ8N6M5 410 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 IL17RCQ8NAC3 791 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 C1orf131Q8NDD1 294 aaKnown RBP13.6□□□□□ -0.23
CNOT1-220ENST00000569916 DQX1Q8TE96 717 aaKnown RBP13.6□□□□□ -0.23
CNOT1-220ENST00000569916 BHMTQ93088 406 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 FAM149B1Q96BN6 582 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 PIWIL1Q96J94 861 aaKnown RBP13.6□□□□□ -0.23
CNOT1-220ENST00000569916 CPXM1Q96SM3 734 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 LHX5Q9H2C1 402 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 LIMA1Q9UHB6 759 aaKnown RBP13.6□□□□□ -0.23
CNOT1-220ENST00000569916 FBXO10Q9UK96 956 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 HCN2Q9UL51 889 aa13.6□□□□□ -0.23
CNOT1-220ENST00000569916 MUC22E2RYF6 1773 aaPredicted RBP13.6□□□□□ -0.23
CNOT1-220ENST00000569916 MYO18AQ92614 2054 aaKnown RBP13.59□□□□□ -0.23
CNOT1-220ENST00000569916 PLXND1Q9Y4D7 1925 aa13.59□□□□□ -0.23
CNOT1-220ENST00000569916 TBC1D3BA6NDS4 549 aa13.59□□□□□ -0.23
CNOT1-220ENST00000569916 F8VZ95 297 aa13.59□□□□□ -0.23
CNOT1-220ENST00000569916 SGK1O00141 431 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms