RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 Q6ZNB5 142 aa13.79□□□□□ -0.2
SPG7-221ENST00000569720 MIB1Q86YT6 1006 aa13.79□□□□□ -0.2
SPG7-221ENST00000569720 ARHGAP18Q8N392 663 aa13.79□□□□□ -0.2
SPG7-221ENST00000569720 IPO4Q8TEX9 1081 aaKnown RBP13.79□□□□□ -0.2
SPG7-221ENST00000569720 TMEM176AQ96HP8 235 aa13.79□□□□□ -0.2
SPG7-221ENST00000569720 UBXN6Q9BZV1 441 aa13.79□□□□□ -0.2
SPG7-221ENST00000569720 SLC32A1Q9H598 525 aa13.79□□□□□ -0.2
SPG7-221ENST00000569720 TMEM74BQ9NUR3 256 aa13.79□□□□□ -0.2
SPG7-221ENST00000569720 RASAL2Q9UJF2 1139 aa13.79□□□□□ -0.2
SPG7-221ENST00000569720 USP3Q9Y6I4 520 aa13.79□□□□□ -0.2
SPG7-221ENST00000569720 A0A1W2PQF6 199 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 PRRT4C9JH25 899 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 GIPC1O14908 333 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 STC2O76061 302 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 MBD3O95983 291 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 CFIP05156 583 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 ENGP17813 658 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 ITPKAP23677 461 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 MAPK8P45983 427 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 GFPT1Q06210 699 aaPredicted RBP13.78□□□□□ -0.2
SPG7-221ENST00000569720 EFEMP1Q12805 493 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 ZCWPW2Q504Y3 356 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 PEAR1Q5VY43 1037 aaPredicted RBP13.78□□□□□ -0.2
SPG7-221ENST00000569720 TOGARAM2Q6ZUX3 1019 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 RSRC2Q7L4I2 434 aaKnown RBP13.78□□□□□ -0.2
SPG7-221ENST00000569720 SCD5Q86SK9 330 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 ELOA2Q8IYF1 753 aaPredicted RBP13.78□□□□□ -0.2
SPG7-221ENST00000569720 BHMTQ93088 406 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 ACOX2Q99424 681 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 GABRG3Q99928 467 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 CISHQ9NSE2 258 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 RMND1Q9NWS8 449 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 RAB20Q9NX57 234 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 PLK2Q9NYY3 685 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 PILRBQ9UKJ0 227 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 HCN2Q9UL51 889 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 STRIP2Q9ULQ0 834 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 SLC6A14Q9UN76 642 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 CYP8B1Q9UNU6 501 aa13.78□□□□□ -0.2
SPG7-221ENST00000569720 ATXN2Q99700 1313 aaKnown RBP13.78□□□□□ -0.2
SPG7-221ENST00000569720 IGHV1OR15-9A0A0B4J2B8 117 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 NPC1O15118 1278 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 NDUFS2O75306 463 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 CYBBP04839 570 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 CISD3P0C7P0 127 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 NDUFV2P19404 249 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 MCCD1P59942 119 aaPredicted RBP13.77□□□□□ -0.21
SPG7-221ENST00000569720 ZNF33AQ06730 810 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 FOXC1Q12948 553 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 STARD3Q14849 445 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 TCERG1LQ5VWI1 586 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 ARHGAP17Q68EM7 881 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 HDDC3Q8N4P3 179 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 DEFB119Q8N690 84 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 SLC4A11Q8NBS3 891 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 UCMAQ8WVF2 138 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 TSG101Q99816 390 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 GOLPH3LQ9H4A5 285 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 CACNA2D2Q9NY47 1150 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 FBXO10Q9UK96 956 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 SLC27A6Q9Y2P4 619 aa13.77□□□□□ -0.21
SPG7-221ENST00000569720 HMBSP08397 361 aa13.76□□□□□ -0.21
SPG7-221ENST00000569720 SERPINF2P08697 491 aa13.76□□□□□ -0.21
SPG7-221ENST00000569720 CORO1AP31146 461 aaKnown RBP13.76□□□□□ -0.21
SPG7-221ENST00000569720 RAD23BP54727 409 aa13.76□□□□□ -0.21
SPG7-221ENST00000569720 YWHAEP62258 255 aaKnown RBP13.76□□□□□ -0.21
SPG7-221ENST00000569720 KIAA1211LQ6NV74 962 aa13.76□□□□□ -0.21
SPG7-221ENST00000569720 KIAA1324Q6UXG2 1013 aaKnown RBP13.76□□□□□ -0.21
SPG7-221ENST00000569720 PIGZQ86VD9 579 aa13.76□□□□□ -0.21
SPG7-221ENST00000569720 SMYD4Q8IYR2 804 aaPredicted RBP13.76□□□□□ -0.21
SPG7-221ENST00000569720 RGL4Q8IZJ4 473 aa13.76□□□□□ -0.21
SPG7-221ENST00000569720 ANKRD52Q8NB46 1076 aa13.76□□□□□ -0.21
SPG7-221ENST00000569720 DEFB124Q8NES8 71 aa13.76□□□□□ -0.21
SPG7-221ENST00000569720 SEMA4DQ92854 862 aa13.76□□□□□ -0.21
SPG7-221ENST00000569720 FOXJ1Q92949 421 aa13.76□□□□□ -0.21
SPG7-221ENST00000569720 ERLEC1Q96DZ1 483 aa13.76□□□□□ -0.21
SPG7-221ENST00000569720 EEF2KMTQ96G04 330 aa13.76□□□□□ -0.21
SPG7-221ENST00000569720 TIGD1Q96MW7 591 aa13.76□□□□□ -0.21
SPG7-221ENST00000569720 GTPBP2Q9BX10 602 aaKnown RBP13.76□□□□□ -0.21
SPG7-221ENST00000569720 LMBRD1Q9NUN5 540 aa13.76□□□□□ -0.21
SPG7-221ENST00000569720 MARCH2Q9P0N8 246 aa13.76□□□□□ -0.21
SPG7-221ENST00000569720 HESX1Q9UBX0 185 aa13.76□□□□□ -0.21
SPG7-221ENST00000569720 HOOK1Q9UJC3 728 aaKnown RBP13.76□□□□□ -0.21
SPG7-221ENST00000569720 RAD54BQ9Y620 910 aa13.76□□□□□ -0.21
SPG7-221ENST00000569720 PCNX2A6NKB5 2137 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 SLC12A8A0AV02 714 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 SLC16A3O15427 465 aaKnown RBP13.75□□□□□ -0.21
SPG7-221ENST00000569720 OPHN1O60890 802 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 ZBED1O96006 694 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 PENKP01210 267 aaPredicted RBP13.75□□□□□ -0.21
SPG7-221ENST00000569720 KLKB1P03952 638 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 SYPP08247 313 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 TKTL1P51854 596 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 ZNF132P52740 706 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 BCAT1P54687 386 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 YWHAGP61981 247 aaKnown RBP eCLIP13.75□□□□□ -0.21
SPG7-221ENST00000569720 SGO2Q562F6 1265 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 DCAF17Q5H9S7 520 aaPredicted RBP13.75□□□□□ -0.21
SPG7-221ENST00000569720 RAB41Q5JT25 222 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 SYCP2LQ5T4T6 812 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms