RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 CMTM8Q8IZV2 173 aa16.74■□□□□ 0.27
USB1-215ENST00000569252 SIX5Q8N196 739 aa16.74■□□□□ 0.27
USB1-215ENST00000569252 ARL14EPQ8N8R7 260 aaPredicted RBP16.74■□□□□ 0.27
USB1-215ENST00000569252 E2F7Q96AV8 911 aa16.74■□□□□ 0.27
USB1-215ENST00000569252 SLC46A2Q9BY10 475 aa16.74■□□□□ 0.27
USB1-215ENST00000569252 THAP2Q9H0W7 228 aa16.74■□□□□ 0.27
USB1-215ENST00000569252 CCSER2Q9H7U1 834 aa16.74■□□□□ 0.27
USB1-215ENST00000569252 METTL5Q9NRN9 209 aaKnown RBP16.74■□□□□ 0.27
USB1-215ENST00000569252 C2orf78A6NCI8 922 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 MOSPD3O75425 235 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 LCA5LO95447 670 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 TMEM253P0C7T8 217 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 PDGFRAP16234 1089 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 SDC4P31431 198 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 MATKP42679 507 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 COG7P83436 770 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 TAF5Q15542 800 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 KLHDC10Q6PID8 442 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 RAD9BQ6WBX8 426 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 MTSS1LQ765P7 747 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 ARCQ7LC44 396 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 DDX42Q86XP3 938 aaKnown RBP eCLIP16.73■□□□□ 0.27
USB1-215ENST00000569252 DNAAF5Q86Y56 855 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 NPAS3Q8IXF0 933 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 DEFB106AQ8N104 65 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 TTC16Q8NEE8 873 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 ZSCAN18Q8TBC5 510 aaPredicted RBP16.73■□□□□ 0.27
USB1-215ENST00000569252 NKD2Q969F2 451 aaPredicted RBP16.73■□□□□ 0.27
USB1-215ENST00000569252 PPP1R9BQ96SB3 815 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 CYP2S1Q96SQ9 504 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 MARCH2Q9P0N8 246 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 CTTNBP2NLQ9P2B4 639 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 RASAL2Q9UJF2 1139 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 NAALADL1Q9UQQ1 740 aa16.73■□□□□ 0.27
USB1-215ENST00000569252 FRYLO94915 3013 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 CACNA1AO00555 2505 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 COCHO43405 550 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 TADA3O75528 432 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 DAB1O75553 588 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 LAMP2P13473 410 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 NOP2P46087 812 aaKnown RBP16.72■□□□□ 0.27
USB1-215ENST00000569252 NAP1L1P55209 391 aaKnown RBP16.72■□□□□ 0.27
USB1-215ENST00000569252 MAMLD1Q13495 774 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 MTF1Q14872 753 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 PLEKHA7Q6IQ23 1121 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 MIB1Q86YT6 1006 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 ARID3BQ8IVW6 561 aaPredicted RBP16.72■□□□□ 0.27
USB1-215ENST00000569252 SMARCD2Q92925 531 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 RNF34Q969K3 372 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 NUP85Q9BW27 656 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 FAM204AQ9H8W3 233 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 KCNK12Q9HB15 430 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 ZFP14Q9HCL3 533 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 TDP1Q9NUW8 608 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 OSER1Q9NX31 292 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 UVRAGQ9P2Y5 699 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 SLC12A6Q9UHW9 1150 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 LCMT1Q9UIC8 334 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 NUDT5Q9UKK9 219 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 FBXL21Q9UKT6 434 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 PAXBP1Q9Y5B6 917 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 R4GN57 208 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 DOCK6Q96HP0 2047 aa16.72■□□□□ 0.27
USB1-215ENST00000569252 SLC12A8A0AV02 714 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 KRBA1A5PL33 1030 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 MYO1FO00160 1098 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 TBX18O95935 607 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 F9P00740 461 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 OAS1P00973 400 aaKnown RBP16.71■□□□□ 0.27
USB1-215ENST00000569252 CYP1A2P05177 515 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 GPD1P21695 349 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 WEE1P30291 646 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 PGFP49763 221 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 SLC7A9P82251 487 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 KIF5AQ12840 1032 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 ANGPT1Q15389 498 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 STXBP5Q5T5C0 1151 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 BHLHA9Q7RTU4 235 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 TMEM139Q8IV31 216 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 RHOT2Q8IXI1 618 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 CELF5Q8N6W0 485 aaKnown RBP16.71■□□□□ 0.27
USB1-215ENST00000569252 OLIG1Q8TAK6 271 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 RXFP2Q8WXD0 754 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 CALR3Q96L12 384 aaKnown RBP16.71■□□□□ 0.27
USB1-215ENST00000569252 ZSWIM3Q96MP5 696 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 SERPINB11Q96P15 392 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 MCEEQ96PE7 176 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 SLC2A13Q96QE2 648 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 MYADMQ96S97 322 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 RNF38Q9H0F5 515 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 KIF9Q9HAQ2 790 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 THG1LQ9NWX6 298 aaKnown RBP16.71■□□□□ 0.27
USB1-215ENST00000569252 TMEM59LQ9UK28 342 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 LSM7Q9UK45 103 aaKnown RBP16.71■□□□□ 0.27
USB1-215ENST00000569252 CA14Q9ULX7 337 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 SH3BP1Q9Y3L3 701 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 NCOR2Q9Y618 2525 aa16.71■□□□□ 0.27
USB1-215ENST00000569252 GPR179Q6PRD1 2367 aa16.71■□□□□ 0.26
USB1-215ENST00000569252 DOCK8Q8NF50 2099 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 SYNJ2BP-COX16A0A087WUM0 186 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms