RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 TDRD12Q587J7 1177 aaKnown RBP13.37□□□□□ -0.27
CDT1-203ENST00000569140 LY6G5CQ5SRR4 150 aa13.37□□□□□ -0.27
CDT1-203ENST00000569140 FAM102AQ5T9C2 384 aaPredicted RBP13.37□□□□□ -0.27
CDT1-203ENST00000569140 MSANTD2Q6P1R3 559 aa13.37□□□□□ -0.27
CDT1-203ENST00000569140 HTR3DQ70Z44 454 aa13.37□□□□□ -0.27
CDT1-203ENST00000569140 TAC4Q86UU9 113 aa13.37□□□□□ -0.27
CDT1-203ENST00000569140 CCDC105Q8IYK2 499 aa13.37□□□□□ -0.27
CDT1-203ENST00000569140 SLC30A5Q8TAD4 765 aa13.37□□□□□ -0.27
CDT1-203ENST00000569140 DQX1Q8TE96 717 aaKnown RBP13.37□□□□□ -0.27
CDT1-203ENST00000569140 OTUB2Q96DC9 234 aa13.37□□□□□ -0.27
CDT1-203ENST00000569140 C18orf8Q96DM3 657 aa13.37□□□□□ -0.27
CDT1-203ENST00000569140 SERPINB11Q96P15 392 aa13.37□□□□□ -0.27
CDT1-203ENST00000569140 DCLK3Q9C098 648 aa13.37□□□□□ -0.27
CDT1-203ENST00000569140 MYO6Q9UM54 1294 aa13.37□□□□□ -0.27
CDT1-203ENST00000569140 HBS1LQ9Y450 684 aaKnown RBP13.37□□□□□ -0.27
CDT1-203ENST00000569140 BDP1A6H8Y1 2624 aa13.37□□□□□ -0.27
CDT1-203ENST00000569140 TMCO5BA8MYB1 307 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 MOCS2O96007 188 aaPredicted RBP13.36□□□□□ -0.27
CDT1-203ENST00000569140 TPM1P09493 284 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 CDK17Q00537 523 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 GAD2Q05329 585 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 KDSRQ06136 332 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 GRSF1Q12849 480 aaKnown RBP eCLIP13.36□□□□□ -0.27
CDT1-203ENST00000569140 LRRC32Q14392 662 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 TRIP4Q15650 581 aaPredicted RBP13.36□□□□□ -0.27
CDT1-203ENST00000569140 CLEC16AQ2KHT3 1053 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 SYPL2Q5VXT5 272 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 NAIF1Q69YI7 327 aaPredicted RBP13.36□□□□□ -0.27
CDT1-203ENST00000569140 OLFML1Q6UWY5 402 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 ZDHHC17Q8IUH5 632 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 ADGRG2Q8IZP9 1017 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 DEFB106AQ8N104 65 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 KIAA1958Q8N8K9 716 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 NAT16Q8N8M0 369 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 CD101Q93033 1021 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 RNF34Q969K3 372 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 CHFRQ96EP1 664 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 NELL2Q99435 816 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 P2RY13Q9BPV8 354 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 DDX23Q9BUQ8 820 aaKnown RBP13.36□□□□□ -0.27
CDT1-203ENST00000569140 BBS2Q9BXC9 721 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 TRIM5Q9C035 493 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 LMAN1LQ9HAT1 526 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 SPHK2Q9NRA0 654 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 RBM12Q9NTZ6 932 aaKnown RBP13.36□□□□□ -0.27
CDT1-203ENST00000569140 SPATA6Q9NWH7 488 aaPredicted RBP13.36□□□□□ -0.27
CDT1-203ENST00000569140 AGO1Q9UL18 857 aaKnown RBP13.36□□□□□ -0.27
CDT1-203ENST00000569140 ZNF510Q9Y2H8 683 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.36□□□□□ -0.27
CDT1-203ENST00000569140 MIA3Q5JRA6 1907 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 KMT2EQ8IZD2 1858 aa13.36□□□□□ -0.27
CDT1-203ENST00000569140 TRDMT1O14717 391 aaKnown RBP13.35□□□□□ -0.27
CDT1-203ENST00000569140 DAB1O75553 588 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 APOEP02649 317 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 CYP1A1P04798 512 aaPredicted RBP13.35□□□□□ -0.27
CDT1-203ENST00000569140 FYNP06241 537 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 SKILP12757 684 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 GBP1P32455 592 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 PBX1P40424 430 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 MLLT6P55198 1093 aaPredicted RBP13.35□□□□□ -0.27
CDT1-203ENST00000569140 NME3Q13232 169 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 FIGNQ5HY92 759 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 NUGGCQ68CJ6 796 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 RHBDF2Q6PJF5 856 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 XYLT1Q86Y38 959 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 TMEM25Q86YD3 366 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 IQCDQ96DY2 449 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 PCDHB18PQ96TA0 734 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 EDEM3Q9BZQ6 932 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 TTYH3Q9C0H2 523 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 RBSNQ9H1K0 784 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 HAUS4Q9H6D7 363 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 METTL5Q9NRN9 209 aaKnown RBP13.35□□□□□ -0.27
CDT1-203ENST00000569140 ASNSD1Q9NWL6 643 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 DDIT4Q9NX09 232 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 ADAM22Q9P0K1 906 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 LUC7L2Q9Y383 392 aaKnown RBP13.35□□□□□ -0.27
CDT1-203ENST00000569140 NCOR1O75376 2440 aa13.35□□□□□ -0.27
CDT1-203ENST00000569140 A0A1W2PQJ5 194 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 SHISA7A6NL88 538 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 GREM1O60565 184 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 TSPAN3O60637 253 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 TRUB2O95900 331 aaKnown RBP13.34□□□□□ -0.27
CDT1-203ENST00000569140 EGFP01133 1207 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 KLKB1P03952 638 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 CYBBP04839 570 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 GLI1P08151 1106 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 TYRP14679 529 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 COL9A1P20849 921 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 CASP14P31944 242 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 CHKAP35790 457 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 GABRB2P47870 512 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 SLC6A11P48066 632 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 SLC11A2P49281 568 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 SULT1E1P49888 294 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 GALK1P51570 392 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 SEC13P55735 322 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 PITX1P78337 314 aaPredicted RBP13.34□□□□□ -0.27
CDT1-203ENST00000569140 ZBED6P86452 979 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 E4F1Q66K89 784 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms