RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 TTC16Q8NEE8 873 aa17.47■□□□□ 0.39
COMMD4-224ENST00000568877 RIN3Q8TB24 985 aa17.47■□□□□ 0.39
COMMD4-224ENST00000568877 ADAM32Q8TC27 787 aa17.47■□□□□ 0.39
COMMD4-224ENST00000568877 BPIFB1Q8TDL5 484 aa17.47■□□□□ 0.39
COMMD4-224ENST00000568877 ADAMTS19Q8TE59 1207 aa17.47■□□□□ 0.39
COMMD4-224ENST00000568877 PDLIM2Q96JY6 352 aa17.47■□□□□ 0.39
COMMD4-224ENST00000568877 SERPINB11Q96P15 392 aa17.47■□□□□ 0.39
COMMD4-224ENST00000568877 EIF3CQ99613 913 aaKnown RBP17.47■□□□□ 0.39
COMMD4-224ENST00000568877 DDX23Q9BUQ8 820 aaKnown RBP17.47■□□□□ 0.39
COMMD4-224ENST00000568877 MRPL47Q9HD33 250 aaKnown RBP17.47■□□□□ 0.39
COMMD4-224ENST00000568877 CFAP97Q9P2B7 532 aa17.47■□□□□ 0.39
COMMD4-224ENST00000568877 STAP1Q9ULZ2 295 aa17.47■□□□□ 0.39
COMMD4-224ENST00000568877 HBS1LQ9Y450 684 aaKnown RBP17.47■□□□□ 0.39
COMMD4-224ENST00000568877 SCINQ9Y6U3 715 aa17.47■□□□□ 0.39
COMMD4-224ENST00000568877 DOCK8Q8NF50 2099 aa17.47■□□□□ 0.39
COMMD4-224ENST00000568877 C2CD4BA6NLJ0 364 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 MSI1O43347 362 aaKnown RBP17.46■□□□□ 0.39
COMMD4-224ENST00000568877 TRUB2O95900 331 aaKnown RBP17.46■□□□□ 0.39
COMMD4-224ENST00000568877 IGLV3-25P01717 112 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 CYP1A2P05177 515 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 TMEM253P0C7T8 217 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 IRF1P10914 325 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 PDGFRAP16234 1089 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 PSMC3P17980 439 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 KPNA1P52294 538 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-224ENST00000568877 RPL7AP62424 266 aaKnown RBP17.46■□□□□ 0.39
COMMD4-224ENST00000568877 PITX1P78337 314 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-224ENST00000568877 NNTQ13423 1086 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 TRIP4Q15650 581 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-224ENST00000568877 SLC25A52Q3SY17 297 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 DCUN1D2Q6PH85 259 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 LRRC8AQ8IWT6 810 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 SLC44A3Q8N4M1 653 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 CCDC112Q8NEF3 446 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 DEPDC1BQ8WUY9 529 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 RXFP2Q8WXD0 754 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 CTNNBL1Q8WYA6 563 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-224ENST00000568877 NT5C3BQ969T7 300 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 MCEEQ96PE7 176 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 NPY6RQ99463 290 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 PACSIN1Q9BY11 444 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 SH3BP1Q9Y3L3 701 aa17.46■□□□□ 0.39
COMMD4-224ENST00000568877 NUP210Q8TEM1 1887 aaPredicted RBP17.46■□□□□ 0.38
COMMD4-224ENST00000568877 E2F8A0AVK6 867 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 M0QYT0 321 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 STC2O76061 302 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 HMBSP08397 361 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 GPD1P21695 349 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 GBP1P32455 592 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 MAGEA1P43355 309 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 SULT1E1P49888 294 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 TBX4P57082 545 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 FCHO2Q0JRZ9 810 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 GRM2Q14416 872 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 RNF135Q8IUD6 432 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 YAF2Q8IY57 180 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 KIAA1958Q8N8K9 716 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 WBP2Q969T9 261 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 PLD4Q96BZ4 506 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 ARHGEF26Q96DR7 871 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 CFAP57Q96MR6 1250 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 NECAB3Q96P71 396 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-224ENST00000568877 TRMT61BQ9BVS5 477 aaKnown RBP17.45■□□□□ 0.38
COMMD4-224ENST00000568877 FAM204AQ9H8W3 233 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 THG1LQ9NWX6 298 aaKnown RBP17.45■□□□□ 0.38
COMMD4-224ENST00000568877 INTUQ9ULD6 942 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 TLR6Q9Y2C9 796 aa17.45■□□□□ 0.38
COMMD4-224ENST00000568877 TMEM191CA6NGB0 347 aa17.44■□□□□ 0.38
COMMD4-224ENST00000568877 IRAK2O43187 625 aa17.44■□□□□ 0.38
COMMD4-224ENST00000568877 GREM1O60565 184 aa17.44■□□□□ 0.38
COMMD4-224ENST00000568877 IPO7O95373 1038 aaKnown RBP17.44■□□□□ 0.38
COMMD4-224ENST00000568877 IGLV3-27P01718 113 aa17.44■□□□□ 0.38
COMMD4-224ENST00000568877 TFE3P19532 575 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-224ENST00000568877 SDC4P31431 198 aa17.44■□□□□ 0.38
COMMD4-224ENST00000568877 PTPN9P43378 593 aa17.44■□□□□ 0.38
COMMD4-224ENST00000568877 EIF4EBP2Q13542 120 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-224ENST00000568877 TDGQ13569 410 aa17.44■□□□□ 0.38
COMMD4-224ENST00000568877 CCDC14Q49A88 953 aa17.44■□□□□ 0.38
COMMD4-224ENST00000568877 OTUD1Q5VV17 481 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-224ENST00000568877 CC2D1AQ6P1N0 951 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-224ENST00000568877 HTR3DQ70Z44 454 aa17.44■□□□□ 0.38
COMMD4-224ENST00000568877 PGAP3Q96FM1 320 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-224ENST00000568877 SLC39A13Q96H72 371 aa17.44■□□□□ 0.38
COMMD4-224ENST00000568877 UHRF1Q96T88 793 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-224ENST00000568877 TBCBQ99426 244 aa17.44■□□□□ 0.38
COMMD4-224ENST00000568877 NUP85Q9BW27 656 aa17.44■□□□□ 0.38
COMMD4-224ENST00000568877 ADAM33Q9BZ11 813 aa17.44■□□□□ 0.38
COMMD4-224ENST00000568877 CD320Q9NPF0 282 aa17.44■□□□□ 0.38
COMMD4-224ENST00000568877 LUC7LQ9NQ29 371 aaKnown RBP17.44■□□□□ 0.38
COMMD4-224ENST00000568877 DDIT4Q9NX09 232 aa17.44■□□□□ 0.38
COMMD4-224ENST00000568877 LSM7Q9UK45 103 aaKnown RBP17.44■□□□□ 0.38
COMMD4-224ENST00000568877 PCDHA13Q9Y5I0 950 aa17.44■□□□□ 0.38
COMMD4-224ENST00000568877 TCF20Q9UGU0 1960 aaKnown RBP17.43■□□□□ 0.38
COMMD4-224ENST00000568877 SYNJ2BP-COX16A0A087WUM0 186 aa17.43■□□□□ 0.38
COMMD4-224ENST00000568877 SLC34A2O95436 690 aa17.43■□□□□ 0.38
COMMD4-224ENST00000568877 F9P00740 461 aa17.43■□□□□ 0.38
COMMD4-224ENST00000568877 CORO1AP31146 461 aaKnown RBP17.43■□□□□ 0.38
COMMD4-224ENST00000568877 GDI1P31150 447 aa17.43■□□□□ 0.38
COMMD4-224ENST00000568877 HARS2P49590 506 aaKnown RBP17.43■□□□□ 0.38
COMMD4-224ENST00000568877 ZNF143P52747 638 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms