RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 STC2O76061 302 aa16.33■□□□□ 0.2
NME3-211ENST00000568561 KLKB1P03952 638 aa16.33■□□□□ 0.2
NME3-211ENST00000568561 NR2F2P24468 414 aa16.33■□□□□ 0.2
NME3-211ENST00000568561 MAOBP27338 520 aa16.33■□□□□ 0.2
NME3-211ENST00000568561 VAMP7P51809 220 aa16.33■□□□□ 0.2
NME3-211ENST00000568561 KIF11P52732 1056 aa16.33■□□□□ 0.2
NME3-211ENST00000568561 ZNF394Q53GI3 561 aa16.33■□□□□ 0.2
NME3-211ENST00000568561 CACUL1Q86Y37 369 aa16.33■□□□□ 0.2
NME3-211ENST00000568561 RGL4Q8IZJ4 473 aa16.33■□□□□ 0.2
NME3-211ENST00000568561 CEP76Q8TAP6 659 aa16.33■□□□□ 0.2
NME3-211ENST00000568561 TMEM174Q8WUU8 243 aa16.33■□□□□ 0.2
NME3-211ENST00000568561 SNX21Q969T3 373 aa16.33■□□□□ 0.2
NME3-211ENST00000568561 IMPG2Q9BZV3 1241 aa16.33■□□□□ 0.2
NME3-211ENST00000568561 NIF3L1Q9GZT8 377 aa16.33■□□□□ 0.2
NME3-211ENST00000568561 RASAL2Q9UJF2 1139 aa16.33■□□□□ 0.2
NME3-211ENST00000568561 DNMT3LQ9UJW3 386 aa16.33■□□□□ 0.2
NME3-211ENST00000568561 RCOR1Q9UKL0 485 aa16.33■□□□□ 0.2
NME3-211ENST00000568561 BAHCC1Q9P281 2608 aa16.32■□□□□ 0.2
NME3-211ENST00000568561 ARHGAP33O14559 1287 aa16.32■□□□□ 0.2
NME3-211ENST00000568561 CALUO43852 315 aaPredicted RBP16.32■□□□□ 0.2
NME3-211ENST00000568561 CILPO75339 1184 aa16.32■□□□□ 0.2
NME3-211ENST00000568561 ZNF217O75362 1048 aa16.32■□□□□ 0.2
NME3-211ENST00000568561 PLA2G4AP47712 749 aa16.32■□□□□ 0.2
NME3-211ENST00000568561 EFEMP1Q12805 493 aa16.32■□□□□ 0.2
NME3-211ENST00000568561 GEN1Q17RS7 908 aa16.32■□□□□ 0.2
NME3-211ENST00000568561 PPP1R26Q5T8A7 1209 aaPredicted RBP16.32■□□□□ 0.2
NME3-211ENST00000568561 HSCBQ8IWL3 235 aa16.32■□□□□ 0.2
NME3-211ENST00000568561 DMXL2Q8TDJ6 3036 aa16.32■□□□□ 0.2
NME3-211ENST00000568561 CAMK1GQ96NX5 476 aa16.32■□□□□ 0.2
NME3-211ENST00000568561 CFAP45Q9UL16 551 aa16.32■□□□□ 0.2
NME3-211ENST00000568561 STON1Q9Y6Q2 735 aa16.32■□□□□ 0.2
NME3-211ENST00000568561 ITPR1Q14643 2758 aa16.32■□□□□ 0.2
NME3-211ENST00000568561 NDUFS2O75306 463 aa16.31■□□□□ 0.2
NME3-211ENST00000568561 CD59P13987 128 aa16.31■□□□□ 0.2
NME3-211ENST00000568561 TRIM21P19474 475 aaKnown RBP16.31■□□□□ 0.2
NME3-211ENST00000568561 CORO1AP31146 461 aaKnown RBP16.31■□□□□ 0.2
NME3-211ENST00000568561 MFAP3P55082 362 aa16.31■□□□□ 0.2
NME3-211ENST00000568561 PLEKHG6Q3KR16 790 aa16.31■□□□□ 0.2
NME3-211ENST00000568561 FUT11Q495W5 492 aa16.31■□□□□ 0.2
NME3-211ENST00000568561 FYB2Q5VWT5 728 aa16.31■□□□□ 0.2
NME3-211ENST00000568561 KLHDC10Q6PID8 442 aa16.31■□□□□ 0.2
NME3-211ENST00000568561 CCDC186Q7Z3E2 898 aa16.31■□□□□ 0.2
NME3-211ENST00000568561 RABEPKQ7Z6M1 372 aa16.31■□□□□ 0.2
NME3-211ENST00000568561 FAM186BQ8IYM0 893 aa16.31■□□□□ 0.2
NME3-211ENST00000568561 CYP3A43Q9HB55 503 aa16.31■□□□□ 0.2
NME3-211ENST00000568561 PNPLA8Q9NP80 782 aa16.31■□□□□ 0.2
NME3-211ENST00000568561 CLEC4EQ9ULY5 219 aa16.31■□□□□ 0.2
NME3-211ENST00000568561 TRAF3IP3Q9Y228 551 aa16.31■□□□□ 0.2
NME3-211ENST00000568561 NEUROG3Q9Y4Z2 214 aa16.31■□□□□ 0.2
NME3-211ENST00000568561 NUMA1Q14980 2115 aa16.31■□□□□ 0.2
NME3-211ENST00000568561 A0A1W2PQD8 194 aa16.3■□□□□ 0.2
NME3-211ENST00000568561 SRRM3A6NNA2 597 aaPredicted RBP16.3■□□□□ 0.2
NME3-211ENST00000568561 UPK3BL1B0FP48 263 aa16.3■□□□□ 0.2
NME3-211ENST00000568561 UPK3BL2E5RIL1 263 aa16.3■□□□□ 0.2
NME3-211ENST00000568561 PENKP01210 267 aaPredicted RBP16.3■□□□□ 0.2
NME3-211ENST00000568561 IL12RB1P42701 662 aa16.3■□□□□ 0.2
NME3-211ENST00000568561 ATL3Q6DD88 541 aa16.3■□□□□ 0.2
NME3-211ENST00000568561 INTS8Q75QN2 995 aaKnown RBP16.3■□□□□ 0.2
NME3-211ENST00000568561 CHCHD4Q8N4Q1 142 aa16.3■□□□□ 0.2
NME3-211ENST00000568561 SEMA4DQ92854 862 aa16.3■□□□□ 0.2
NME3-211ENST00000568561 EEF2KMTQ96G04 330 aa16.3■□□□□ 0.2
NME3-211ENST00000568561 TOE1Q96GM8 510 aaKnown RBP16.3■□□□□ 0.2
NME3-211ENST00000568561 ZNF419Q96HQ0 510 aaPredicted RBP16.3■□□□□ 0.2
NME3-211ENST00000568561 ARID3AQ99856 593 aa16.3■□□□□ 0.2
NME3-211ENST00000568561 DUSP16Q9BY84 665 aa16.3■□□□□ 0.2
NME3-211ENST00000568561 MKRN2Q9H000 416 aaKnown RBP16.3■□□□□ 0.2
NME3-211ENST00000568561 FBXO10Q9UK96 956 aa16.3■□□□□ 0.2
NME3-211ENST00000568561 HPSEQ9Y251 543 aa16.3■□□□□ 0.2
NME3-211ENST00000568561 KNL1Q8NG31 2342 aa16.3■□□□□ 0.2
NME3-211ENST00000568561 MUC22E2RYF6 1773 aaPredicted RBP16.29■□□□□ 0.2
NME3-211ENST00000568561 TMEM8BA6NDV4 472 aa16.29■□□□□ 0.2
NME3-211ENST00000568561 MEI4A8MW99 385 aa16.29■□□□□ 0.2
NME3-211ENST00000568561 GFRA2O00451 464 aa16.29■□□□□ 0.2
NME3-211ENST00000568561 SH3BP5O60239 455 aa16.29■□□□□ 0.2
NME3-211ENST00000568561 RALAP11233 206 aa16.29■□□□□ 0.2
NME3-211ENST00000568561 KRT13P13646 458 aa16.29■□□□□ 0.2
NME3-211ENST00000568561 HOXB3P14651 431 aaPredicted RBP16.29■□□□□ 0.2
NME3-211ENST00000568561 CMA1P23946 247 aa16.29■□□□□ 0.2
NME3-211ENST00000568561 CD6P30203 668 aa16.29■□□□□ 0.2
NME3-211ENST00000568561 STARD3Q14849 445 aa16.29■□□□□ 0.2
NME3-211ENST00000568561 DENND1CQ8IV53 801 aa16.29■□□□□ 0.2
NME3-211ENST00000568561 ZCCHC9Q8N567 271 aaKnown RBP16.29■□□□□ 0.2
NME3-211ENST00000568561 SORCS1Q8WY21 1168 aa16.29■□□□□ 0.2
NME3-211ENST00000568561 HEXIM2Q96MH2 286 aaKnown RBP16.29■□□□□ 0.2
NME3-211ENST00000568561 GPR174Q9BXC1 333 aa16.29■□□□□ 0.2
NME3-211ENST00000568561 PRDM16Q9HAZ2 1276 aa16.29■□□□□ 0.2
NME3-211ENST00000568561 DNAAF2Q9NVR5 837 aaKnown RBP16.29■□□□□ 0.2
NME3-211ENST00000568561 CLIC5Q9NZA1 410 aa16.29■□□□□ 0.2
NME3-211ENST00000568561 AGO1Q9UL18 857 aaKnown RBP16.29■□□□□ 0.2
NME3-211ENST00000568561 MSRB2Q9Y3D2 182 aa16.29■□□□□ 0.2
NME3-211ENST00000568561 USP3Q9Y6I4 520 aa16.29■□□□□ 0.2
NME3-211ENST00000568561 FREM2Q5SZK8 3169 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 KCNJ18B7U540 433 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 MAPK13O15264 365 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 RHOBTB3O94955 611 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 SYPP08247 313 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 NCAM1P13591 858 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 SYKP43405 635 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 PSEN1P49768 467 aa16.28■□□□□ 0.2
NME3-211ENST00000568561 NDUFA8P51970 172 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms