RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 GBP1P32455 592 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 MPLP40238 635 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 KIR2DL1P43626 348 aaPredicted RBP13.53□□□□□ -0.24
TSC2-220ENST00000568238 COPB1P53618 953 aaKnown RBP13.53□□□□□ -0.24
TSC2-220ENST00000568238 SLC8A3P57103 927 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 YWHAEP62258 255 aaKnown RBP13.53□□□□□ -0.24
TSC2-220ENST00000568238 TPM4P67936 248 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 CUL2Q13617 745 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 CCDC6Q16204 474 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 USP39Q53GS9 565 aaKnown RBP13.53□□□□□ -0.24
TSC2-220ENST00000568238 EOGTQ5NDL2 527 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 ARHGAP17Q68EM7 881 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 NUDT18Q6ZVK8 323 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 HTR3DQ70Z44 454 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 TRMT11Q7Z4G4 463 aaKnown RBP13.53□□□□□ -0.24
TSC2-220ENST00000568238 C11orf74Q86VG3 221 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 RASSF3Q86WH2 238 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 TMEM25Q86YD3 366 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 TERB1Q8NA31 727 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 C12orf50Q8NA57 414 aaPredicted RBP13.53□□□□□ -0.24
TSC2-220ENST00000568238 TATDN2Q93075 761 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 DUSP15Q9H1R2 295 aaPredicted RBP13.53□□□□□ -0.24
TSC2-220ENST00000568238 DNAJC17Q9NVM6 304 aaKnown RBP13.53□□□□□ -0.24
TSC2-220ENST00000568238 CLIC5Q9NZA1 410 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 NUDT5Q9UKK9 219 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 USP3Q9Y6I4 520 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 TNRC6BQ9UPQ9 1833 aaKnown RBP13.53□□□□□ -0.24
TSC2-220ENST00000568238 DCDC2BA2VCK2 349 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 NEDD8-MDP1E9PL57 170 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 SGK1O00141 431 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 SLC30A4O14863 429 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 CACNG3O60359 315 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 GDF9O60383 454 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 ZNF806P0C7X5 589 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 TYRP14679 529 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 HNRNPLP14866 589 aaKnown RBP eCLIP13.52□□□□□ -0.25
TSC2-220ENST00000568238 PLA2G4AP47712 749 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 BCAT1P54687 386 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 SF3A2Q15428 464 aaKnown RBP13.52□□□□□ -0.25
TSC2-220ENST00000568238 GOLGA7BQ2TAP0 167 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 C10orf76Q5T2E6 689 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 GRAMD4Q6IC98 578 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 TMEM92Q6UXU6 159 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 GBP6Q6ZN66 633 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 SCD5Q86SK9 330 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 TTC30AQ86WT1 665 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 MIB1Q86YT6 1006 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 ARHGAP18Q8N392 663 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 ZNF513Q8N8E2 541 aaPredicted RBP13.52□□□□□ -0.25
TSC2-220ENST00000568238 ANKRD52Q8NB46 1076 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 EHBP1Q8NDI1 1231 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 NT5C1BQ96P26 610 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 XPO6Q96QU8 1125 aaKnown RBP13.52□□□□□ -0.25
TSC2-220ENST00000568238 BBS2Q9BXC9 721 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 POLMQ9NP87 494 aaPredicted RBP13.52□□□□□ -0.25
TSC2-220ENST00000568238 ZDHHC4Q9NPG8 344 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 MARK1Q9P0L2 795 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 WDR35Q9P2L0 1181 aa13.52□□□□□ -0.25
TSC2-220ENST00000568238 CHD8Q9HCK8 2581 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 CEP192Q8TEP8 1941 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 LGALS16A8MUM7 142 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 ADAM23O75077 832 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 STC2O76061 302 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 CD19P15391 556 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 SLC9A1P19634 815 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 TBXAS1P24557 533 aaPredicted RBP13.51□□□□□ -0.25
TSC2-220ENST00000568238 APBA1Q02410 837 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 EXOC3L4Q17RC7 722 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 SGO2Q562F6 1265 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 PLA2G2CQ5R387 149 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 FKBP15Q5T1M5 1219 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 EMC10Q5UCC4 262 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 TRIM65Q6PJ69 517 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 Q6ZNB5 142 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 TPGS1Q6ZTW0 290 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 RSRC2Q7L4I2 434 aaKnown RBP13.51□□□□□ -0.25
TSC2-220ENST00000568238 PIGZQ86VD9 579 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 ARHGEF19Q8IW93 802 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 PPM1KQ8N3J5 372 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 ZNF276Q8N554 614 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 LMO3Q8TAP4 145 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 KCNV2Q8TDN2 545 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 SPACA7Q96KW9 195 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 UBXN6Q9BZV1 441 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 VPS45Q9NRW7 570 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 BCCIPQ9P287 314 aaKnown RBP eCLIP13.51□□□□□ -0.25
TSC2-220ENST00000568238 RASAL2Q9UJF2 1139 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 TSPAN16Q9UKR8 245 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 INVSQ9Y283 1065 aa13.51□□□□□ -0.25
TSC2-220ENST00000568238 TPRP12270 2363 aaKnown RBP13.5□□□□□ -0.25
TSC2-220ENST00000568238 GTPBP10A4D1E9 387 aaKnown RBP13.5□□□□□ -0.25
TSC2-220ENST00000568238 TRIM24O15164 1050 aa13.5□□□□□ -0.25
TSC2-220ENST00000568238 SERPINC1P01008 464 aa13.5□□□□□ -0.25
TSC2-220ENST00000568238 TKTL1P51854 596 aa13.5□□□□□ -0.25
TSC2-220ENST00000568238 LIMK1P53667 647 aa13.5□□□□□ -0.25
TSC2-220ENST00000568238 COG7P83436 770 aa13.5□□□□□ -0.25
TSC2-220ENST00000568238 CREB5Q02930 508 aa13.5□□□□□ -0.25
TSC2-220ENST00000568238 BST2Q10589 180 aaKnown RBP13.5□□□□□ -0.25
TSC2-220ENST00000568238 EFEMP1Q12805 493 aa13.5□□□□□ -0.25
TSC2-220ENST00000568238 RAB41Q5JT25 222 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms