RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 TRIM43BA6NCK2 446 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 H7C0C1 242 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 H7C4K7 107 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 AGPSO00116 658 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 TNFRSF10BO14763 440 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 TRIM66O15016 1216 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 POLR3GO15318 223 aaPredicted RBP12.19□□□□□ -0.46
BBS4-213ENST00000567279 PPFIA2O75334 1257 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 DGKIO75912 1065 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 TIMP1P01033 207 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 CSF2RAP15509 400 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 RAG1P15918 1043 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 GOT1P17174 413 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 ITGB8P26012 769 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 ATP5OP48047 213 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 ALDH7A1P49419 539 aaKnown RBP12.19□□□□□ -0.46
BBS4-213ENST00000567279 GDF10P55107 478 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 YWHAGP61981 247 aaKnown RBP eCLIP12.19□□□□□ -0.46
BBS4-213ENST00000567279 GPS1Q13098 491 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 DDR2Q16832 855 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 DARS2Q6PI48 645 aaKnown RBP12.19□□□□□ -0.46
BBS4-213ENST00000567279 VSTM1Q6UX27 236 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 B4GALNT4Q76KP1 1039 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 TAS1R1Q7RTX1 841 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 TMCO2Q7Z6W1 182 aaPredicted RBP12.19□□□□□ -0.46
BBS4-213ENST00000567279 TAC4Q86UU9 113 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 ZC3H18Q86VM9 953 aaKnown RBP12.19□□□□□ -0.46
BBS4-213ENST00000567279 PSTKQ8IV42 348 aaKnown RBP12.19□□□□□ -0.46
BBS4-213ENST00000567279 TTC9BQ8N6N2 239 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 BBOF1Q8ND07 529 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 PIK3R5Q8WYR1 880 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 TRIM43Q96BQ3 446 aaPredicted RBP12.19□□□□□ -0.46
BBS4-213ENST00000567279 CSPG4P5Q96PW8 444 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 TTPALQ9BTX7 342 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 TRIM62Q9BVG3 475 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 CWH43Q9H720 699 aa12.19□□□□□ -0.46
BBS4-213ENST00000567279 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.19□□□□□ -0.46
BBS4-213ENST00000567279 DNALI1O14645 258 aaPredicted RBP12.18□□□□□ -0.46
BBS4-213ENST00000567279 MAP3K6O95382 1288 aa12.18□□□□□ -0.46
BBS4-213ENST00000567279 SYF2O95926 243 aaKnown RBP12.18□□□□□ -0.46
BBS4-213ENST00000567279 AMHP03971 560 aa12.18□□□□□ -0.46
BBS4-213ENST00000567279 PMS2P54278 862 aa12.18□□□□□ -0.46
BBS4-213ENST00000567279 DEFB103AP81534 67 aa12.18□□□□□ -0.46
BBS4-213ENST00000567279 CAV1Q03135 178 aa12.18□□□□□ -0.46
BBS4-213ENST00000567279 BTBD8Q5XKL5 378 aa12.18□□□□□ -0.46
BBS4-213ENST00000567279 PRSS55Q6UWB4 352 aaPredicted RBP12.18□□□□□ -0.46
BBS4-213ENST00000567279 RSPO2Q6UXX9 243 aaPredicted RBP12.18□□□□□ -0.46
BBS4-213ENST00000567279 ANKS3Q6ZW76 656 aa12.18□□□□□ -0.46
BBS4-213ENST00000567279 UNC45BQ8IWX7 931 aa12.18□□□□□ -0.46
BBS4-213ENST00000567279 GOLGA6L1Q8N7Z2 621 aa12.18□□□□□ -0.46
BBS4-213ENST00000567279 ATAD1Q8NBU5 361 aa12.18□□□□□ -0.46
BBS4-213ENST00000567279 DQX1Q8TE96 717 aaKnown RBP12.18□□□□□ -0.46
BBS4-213ENST00000567279 PGAP3Q96FM1 320 aaPredicted RBP12.18□□□□□ -0.46
BBS4-213ENST00000567279 C8orf48Q96LL4 319 aa12.18□□□□□ -0.46
BBS4-213ENST00000567279 TMEM106CQ9BVX2 250 aa12.18□□□□□ -0.46
BBS4-213ENST00000567279 TXLNGYQ9BZA5 131 aa12.18□□□□□ -0.46
BBS4-213ENST00000567279 WDR6Q9NNW5 1121 aaKnown RBP12.18□□□□□ -0.46
BBS4-213ENST00000567279 CWC15Q9P013 229 aaKnown RBP12.18□□□□□ -0.46
BBS4-213ENST00000567279 ABHD14A-ACY1A0A1B0GW23 586 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 MTMR11A4FU01 709 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 H3BRJ5 948 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 TP73O15350 636 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 CREB3O43889 395 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 ZFXP17010 805 aaPredicted RBP12.17□□□□□ -0.46
BBS4-213ENST00000567279 CHKAP35790 457 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 MAGEA11P43364 429 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 RHBDF2Q6PJF5 856 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 IQCKQ8N0W5 287 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 NUP93Q8N1F7 819 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 FAM71DQ8N9W8 422 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 RNF139Q8WU17 664 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 NTAN1Q96AB6 310 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 SLC9A7Q96T83 725 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 SEPT5Q99719 369 aaPredicted RBP12.17□□□□□ -0.46
BBS4-213ENST00000567279 ABCC13Q9NSE7 274 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 RCOR3Q9P2K3 495 aaPredicted RBP12.17□□□□□ -0.46
BBS4-213ENST00000567279 KIAA1671Q9BY89 1806 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 KIAA0100Q14667 2235 aaKnown RBP12.17□□□□□ -0.46
BBS4-213ENST00000567279 A0A1W2PQH9 124 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 EEF2KO00418 725 aaKnown RBP12.17□□□□□ -0.46
BBS4-213ENST00000567279 KIAA0355O15063 1070 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 OPA1O60313 960 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 RNF40O75150 1001 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 SOAT2O75908 522 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 F9P00740 461 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 ACRP10323 421 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 AMPD1P23109 780 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 ADRA1BP35368 520 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 CTCFP49711 727 aaPredicted RBP12.17□□□□□ -0.46
BBS4-213ENST00000567279 AIF1P55008 147 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 WDR5P61964 334 aaKnown RBP12.17□□□□□ -0.46
BBS4-213ENST00000567279 GPR17Q13304 367 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 SLMAPQ14BN4 828 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 ARL13BQ3SXY8 428 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 RNF19BQ6ZMZ0 732 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 OR2W6PQ8NHA6 318 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 SPPL2BQ8TCT7 592 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 RNF34Q969K3 372 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 TOP1MTQ969P6 601 aa12.17□□□□□ -0.46
BBS4-213ENST00000567279 IGSF21Q96ID5 467 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms