RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 NMUR1Q9HB89 426 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 CNGB3Q9NQW8 809 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 OLA1Q9NTK5 396 aaKnown RBP14.07□□□□□ -0.16
CLK3-218ENST00000566926 STRIP2Q9ULQ0 834 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 OTOL1A6NHN0 477 aaPredicted RBP14.06□□□□□ -0.16
CLK3-218ENST00000566926 CCDC175P0C221 793 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 BRD2P25440 801 aaKnown RBP14.06□□□□□ -0.16
CLK3-218ENST00000566926 GNA15P30679 374 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 USP8P40818 1118 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 ACADSBP45954 432 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 CCR3P51677 355 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 BPIFB4P59827 614 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 YWHAGP61981 247 aaKnown RBP eCLIP14.06□□□□□ -0.16
CLK3-218ENST00000566926 KRT83P78385 493 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 KLHL30Q0D2K2 578 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 ADIGQ0VDE8 80 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 DRAP1Q14919 205 aaPredicted RBP14.06□□□□□ -0.16
CLK3-218ENST00000566926 ZNF528Q3MIS6 628 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 FBXO43Q4G163 708 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 PREPLQ4J6C6 727 aaPredicted RBP14.06□□□□□ -0.16
CLK3-218ENST00000566926 TMEM196Q5HYL7 178 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 BTBD8Q5XKL5 378 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 WDR59Q6PJI9 974 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 HTR3DQ70Z44 454 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 RSRC2Q7L4I2 434 aaKnown RBP14.06□□□□□ -0.16
CLK3-218ENST00000566926 SCD5Q86SK9 330 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 SPEM1Q8N4L4 309 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 SLC35F5Q8WV83 523 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 SHC3Q92529 594 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 CD101Q93033 1021 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 KLF16Q9BXK1 252 aaPredicted RBP14.06□□□□□ -0.16
CLK3-218ENST00000566926 ULBP1Q9BZM6 244 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 NHEJ1Q9H9Q4 299 aaPredicted RBP14.06□□□□□ -0.16
CLK3-218ENST00000566926 OSER1Q9NX31 292 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.06□□□□□ -0.16
CLK3-218ENST00000566926 ZNF510Q9Y2H8 683 aa14.06□□□□□ -0.16
CLK3-218ENST00000566926 EPN1Q9Y6I3 576 aaPredicted RBP14.06□□□□□ -0.16
CLK3-218ENST00000566926 PIEZO1Q92508 2521 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 TULP2O00295 520 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 THAP12O43422 761 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 ZNF500O60304 480 aaPredicted RBP14.05□□□□□ -0.16
CLK3-218ENST00000566926 ATG13O75143 517 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 FBXO21O94952 628 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 TBX18O95935 607 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 IRF1P10914 325 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 PGFP49763 221 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 GALK1P51570 392 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 NRLP54845 237 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 GAD2Q05329 585 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 PTK2Q05397 1052 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 MTAPQ13126 283 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 CCINQ13939 588 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 DHCR24Q15392 516 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 SPA17Q15506 151 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 TDRD12Q587J7 1177 aaKnown RBP14.05□□□□□ -0.16
CLK3-218ENST00000566926 GJB7Q6PEY0 223 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 RNF139Q8WU17 664 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 ZNF606Q8WXB4 792 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 IRGQQ8WZA9 623 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 GOLGA1Q92805 767 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 SECISBP2LQ93073 1101 aaKnown RBP14.05□□□□□ -0.16
CLK3-218ENST00000566926 FAM126AQ9BYI3 521 aaPredicted RBP14.05□□□□□ -0.16
CLK3-218ENST00000566926 DCLK3Q9C098 648 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 SEMA4AQ9H3S1 761 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 ABCC13Q9NSE7 274 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 PYCARDQ9ULZ3 195 aa14.05□□□□□ -0.16
CLK3-218ENST00000566926 KIAA1549LQ6ZVL6 1849 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 SOWAHDA6NJG2 315 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.04□□□□□ -0.16
CLK3-218ENST00000566926 EIF3CLB5ME19 914 aaKnown RBP14.04□□□□□ -0.16
CLK3-218ENST00000566926 SART1O43290 800 aaKnown RBP14.04□□□□□ -0.16
CLK3-218ENST00000566926 AKR1B10O60218 316 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 NDUFA10O95299 355 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 TUBB4AP04350 444 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 CYP17A1P05093 508 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 SP9P0CG40 484 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 ADH5P11766 374 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 LCP1P13796 627 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 EIF2DP41214 584 aaKnown RBP14.04□□□□□ -0.16
CLK3-218ENST00000566926 NBL1P41271 181 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 CXCL12P48061 93 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 APBA1Q02410 837 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 CSTF1Q05048 431 aaKnown RBP14.04□□□□□ -0.16
CLK3-218ENST00000566926 C10orf76Q5T2E6 689 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 HGSNATQ68CP4 663 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 PMF1Q6P1K2 205 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 NUDT18Q6ZVK8 323 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 IRF2BP2Q7Z5L9 587 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 FAM71AQ8IYT1 594 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 STK32AQ8WU08 396 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 EIF3CQ99613 913 aaKnown RBP14.04□□□□□ -0.16
CLK3-218ENST00000566926 ZSWIM1Q9BR11 485 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 TRIM62Q9BVG3 475 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 MARCH2Q9P0N8 246 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 ARHGAP20Q9P2F6 1191 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 RASAL2Q9UJF2 1139 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 NUDT5Q9UKK9 219 aa14.04□□□□□ -0.16
CLK3-218ENST00000566926 PROB1E7EW31 1015 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 LCA5LO95447 670 aa14.03□□□□□ -0.16
CLK3-218ENST00000566926 GPD2P43304 727 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms