RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 FAM78AQ5JUQ0 283 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 KLHDC10Q6PID8 442 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 RAD9BQ6WBX8 426 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 SPNS2Q8IVW8 549 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 LRRC8AQ8IWT6 810 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 CTNNBL1Q8WYA6 563 aaPredicted RBP11.99□□□□□ -0.49
KARS-207ENST00000566560 ZSWIM3Q96MP5 696 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 ASB16Q96NS5 453 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 MCEEQ96PE7 176 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 SLC2A13Q96QE2 648 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 SLC22A12Q96S37 553 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 SLC46A2Q9BY10 475 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 PACSIN1Q9BY11 444 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 THAP2Q9H0W7 228 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 SMG9Q9H0W8 520 aaKnown RBP11.99□□□□□ -0.49
KARS-207ENST00000566560 SMOC2Q9H3U7 446 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 LUC7LQ9NQ29 371 aaKnown RBP11.99□□□□□ -0.49
KARS-207ENST00000566560 SMPD4Q9NXE4 827 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 EPS15L1Q9UBC2 864 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 MYO1AQ9UBC5 1043 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 DNMT3LQ9UJW3 386 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 NAALADL1Q9UQQ1 740 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 SCINQ9Y6U3 715 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 TCF20Q9UGU0 1960 aaKnown RBP11.99□□□□□ -0.49
KARS-207ENST00000566560 TCRBV5S1A1TA0A578 114 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 ANKRD62A6NC57 917 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 EIF3CLB5ME19 914 aaKnown RBP11.98□□□□□ -0.49
KARS-207ENST00000566560 ZNF263O14978 683 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 TBX18O95935 607 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 H2AFZP0C0S5 128 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 KRT3P12035 628 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 FLT3P36888 993 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 GALCP54803 685 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 SLC7A9P82251 487 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 DCAF6Q58WW2 860 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 MSANTD2Q6P1R3 559 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 DCUN1D2Q6PH85 259 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 H2AFVQ71UI9 128 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 MTSS1LQ765P7 747 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 BEND5Q7L4P6 421 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 TAC4Q86UU9 113 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 MIB1Q86YT6 1006 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 ARID3BQ8IVW6 561 aaPredicted RBP11.98□□□□□ -0.49
KARS-207ENST00000566560 DEFB106AQ8N104 65 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 EMC1Q8N766 993 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 TTC16Q8NEE8 873 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 DQX1Q8TE96 717 aaKnown RBP11.98□□□□□ -0.49
KARS-207ENST00000566560 SMARCD2Q92925 531 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 SERPINB11Q96P15 392 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 CYP2S1Q96SQ9 504 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 EIF3CQ99613 913 aaKnown RBP11.98□□□□□ -0.49
KARS-207ENST00000566560 RNF38Q9H0F5 515 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 FAM204AQ9H8W3 233 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 KIF9Q9HAQ2 790 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 PARVAQ9NVD7 372 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 MARCH2Q9P0N8 246 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 STAP1Q9ULZ2 295 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 ARHGAP26Q9UNA1 814 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 CPQQ9Y646 472 aa11.98□□□□□ -0.49
KARS-207ENST00000566560 EPN1Q9Y6I3 576 aaPredicted RBP11.98□□□□□ -0.49
KARS-207ENST00000566560 PRUNE2Q8WUY3 3088 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 ARHGAP6O43182 974 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 MSI1O43347 362 aaKnown RBP11.97□□□□□ -0.49
KARS-207ENST00000566560 LCA5LO95447 670 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 FYNP06241 537 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 TMEM253P0C7T8 217 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 IRF1P10914 325 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 FCARP24071 287 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 WEE1P30291 646 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 MATKP42679 507 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 SULT1E1P49888 294 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 CCZ1BP86790 482 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 CCZ1P86791 482 aaPredicted RBP11.97□□□□□ -0.49
KARS-207ENST00000566560 ZP2Q05996 745 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 USP4Q13107 963 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 MAMLD1Q13495 774 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 C10orf76Q5T2E6 689 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 SYPL2Q5VXT5 272 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 PLEKHA7Q6IQ23 1121 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 TRNP1Q6NT89 227 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 ARCQ7LC44 396 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 ADHFE1Q8IWW8 467 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 ZNF276Q8N554 614 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 ACRBPQ8NEB7 543 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 ST13P5Q8NFI4 369 aaPredicted RBP11.97□□□□□ -0.49
KARS-207ENST00000566560 JOSD2Q8TAC2 188 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 ADAM32Q8TC27 787 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 USP13Q92995 863 aaPredicted RBP11.97□□□□□ -0.49
KARS-207ENST00000566560 ARHGEF26Q96DR7 871 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 ASB2Q96Q27 587 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 KXD1Q9BQD3 176 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 DESI2Q9BSY9 194 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 NUP85Q9BW27 656 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 ZFP14Q9HCL3 533 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 TDP1Q9NUW8 608 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.97□□□□□ -0.49
KARS-207ENST00000566560 PRKAG3Q9UGI9 489 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 SFMBT1Q9UHJ3 866 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 TMEM59LQ9UK28 342 aa11.97□□□□□ -0.49
KARS-207ENST00000566560 CCL26Q9Y258 94 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms