RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 KTI12Q96EK9 354 aaPredicted RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 MCRS1Q96EZ8 462 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 ZNF845Q96IR2 970 aaPredicted RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 PIGSQ96S52 555 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 PIP5K1AQ99755 562 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 HGH1Q9BTY7 390 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 BDH2Q9BUT1 245 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 SPATA5L1Q9BVQ7 753 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 PHF7Q9BWX1 381 aaPredicted RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 IMPG2Q9BZV3 1241 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 KLHL4Q9C0H6 718 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 INTS2Q9H0H0 1204 aaKnown RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 ABCG4Q9H172 646 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 MUC13Q9H3R2 512 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 CCDC134Q9H6E4 229 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 DLL4Q9NR61 685 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 PDRG1Q9NUG6 133 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 NCDNQ9UBB6 729 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 ZNF70Q9UC06 446 aaPredicted RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 Q9UFV3 132 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 SLC23A1Q9UHI7 598 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 SARDHQ9UL12 918 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 BAG5Q9UL15 447 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 PA2G4Q9UQ80 394 aaKnown RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 GDAQ9Y2T3 454 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 RBM8AQ9Y5S9 174 aaKnown RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 CDHR4A6H8M9 788 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 FAM90A20PA6NIJ5 464 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 AGAP5A6NIR3 686 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 IPO8O15397 1037 aaKnown RBP3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 SRGAP3O43295 1099 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 CCP110O43303 1012 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 GUCY1B2O75343 617 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 SLC43A1O75387 559 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 HAUS5O94927 633 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 AGFG2O95081 481 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 METTL18O95568 372 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 CYBBP04839 570 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 HGFP14210 728 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 GYPEP15421 78 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 TM4SF1P30408 202 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 SLC5A2P31639 672 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 PBX3P40426 434 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 CASRP41180 1078 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 PRKAG1P54619 331 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 SLC12A2P55011 1212 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 HSD17B7P56937 341 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 MRPS35P82673 323 aaKnown RBP3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 BFSP1Q12934 665 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 SP140Q13342 867 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 ADAM15Q13444 863 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 BOP1Q14137 746 aaKnown RBP3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 CSHL1Q14406 222 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 RAB3GAP1Q15042 981 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 STILQ15468 1287 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 PTPN14Q15678 1187 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 NPY5RQ15761 445 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 KYNUQ16719 465 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 CR1LQ2VPA4 569 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 TTC31Q49AM3 519 aaPredicted RBP3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 TIGD5Q53EQ6 642 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 MFSD14BQ5SR56 506 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 MANEALQ5VSG8 457 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 FAM160B1Q5W0V3 765 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 KRT40Q6A162 431 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 ANKRD40Q6AI12 368 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 DCLRE1AQ6PJP8 1040 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 PAQR3Q6TCH7 311 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 DPP8Q6V1X1 898 aaPredicted RBP3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 ZNF572Q7Z3I7 529 aaPredicted RBP3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 GALNT7Q86SF2 657 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 ADGRG6Q86SQ4 1221 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 ZC3H18Q86VM9 953 aaKnown RBP3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 LINC00346Q8IVM7 164 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 RTKN2Q8IZC4 609 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 DTX3Q8N9I9 347 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 TRIML1Q8N9V2 468 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 TMIEQ8NEW7 156 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 DNERQ8NFT8 737 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 MOSPD2Q8NHP6 518 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 GDAP1Q8TB36 358 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 BPIFB1Q8TDL5 484 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 ZFPM2Q8WW38 1151 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 DDX17Q92841 729 aaKnown RBP3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 NKD2Q969F2 451 aaPredicted RBP3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 SIPA1Q96FS4 1042 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 PERPQ96FX8 193 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 CEP95Q96GE4 821 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 SLC46A1Q96NT5 459 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 ABHD1Q96SE0 405 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 SYT3Q9BQG1 590 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 FSD1Q9BTV5 496 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 TTPALQ9BTX7 342 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 MRI1Q9BV20 369 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 HERC2P3Q9BVR0 1158 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 ACAT2Q9BWD1 397 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 SLC46A2Q9BY10 475 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 ANKRD2Q9GZV1 360 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 C2orf40Q9H1Z8 148 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 TNFRSF12AQ9NP84 129 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms