RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 ZNF217O75362 1048 aa12.54□□□□□ -0.4
UBR1-206ENST00000566493 GABRG2P18507 467 aa12.54□□□□□ -0.4
UBR1-206ENST00000566493 CHKAP35790 457 aa12.54□□□□□ -0.4
UBR1-206ENST00000566493 PTGER3P43115 390 aa12.54□□□□□ -0.4
UBR1-206ENST00000566493 EFEMP1Q12805 493 aa12.54□□□□□ -0.4
UBR1-206ENST00000566493 ZCWPW2Q504Y3 356 aa12.54□□□□□ -0.4
UBR1-206ENST00000566493 SH3PXD2AQ5TCZ1 1133 aa12.54□□□□□ -0.4
UBR1-206ENST00000566493 TCERG1LQ5VWI1 586 aa12.54□□□□□ -0.4
UBR1-206ENST00000566493 RSRC2Q7L4I2 434 aaKnown RBP12.54□□□□□ -0.4
UBR1-206ENST00000566493 SCD5Q86SK9 330 aa12.54□□□□□ -0.4
UBR1-206ENST00000566493 SMYD4Q8IYR2 804 aaPredicted RBP12.54□□□□□ -0.4
UBR1-206ENST00000566493 CEP76Q8TAP6 659 aa12.54□□□□□ -0.4
UBR1-206ENST00000566493 IPO4Q8TEX9 1081 aaKnown RBP12.54□□□□□ -0.4
UBR1-206ENST00000566493 SEMA4DQ92854 862 aa12.54□□□□□ -0.4
UBR1-206ENST00000566493 EEF2KMTQ96G04 330 aa12.54□□□□□ -0.4
UBR1-206ENST00000566493 UBXN6Q9BZV1 441 aa12.54□□□□□ -0.4
UBR1-206ENST00000566493 FAM124BQ9H5Z6 455 aaPredicted RBP12.54□□□□□ -0.4
UBR1-206ENST00000566493 CALCOCO1Q9P1Z2 691 aa12.54□□□□□ -0.4
UBR1-206ENST00000566493 USP3Q9Y6I4 520 aa12.54□□□□□ -0.4
UBR1-206ENST00000566493 TNRC6BQ9UPQ9 1833 aaKnown RBP12.53□□□□□ -0.4
UBR1-206ENST00000566493 A0A1W2PQF6 199 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 PRRT4C9JH25 899 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 CDX4O14627 284 aaPredicted RBP12.53□□□□□ -0.4
UBR1-206ENST00000566493 STC2O76061 302 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 CYBBP04839 570 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 CFIP05156 583 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 HMBSP08397 361 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 CEACAM1P13688 526 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 HOXD12P35452 270 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 MAPK8P45983 427 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 ATXN3P54252 364 aaPredicted RBP12.53□□□□□ -0.4
UBR1-206ENST00000566493 RAD23BP54727 409 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 MCCD1P59942 119 aaPredicted RBP12.53□□□□□ -0.4
UBR1-206ENST00000566493 YWHAEP62258 255 aaKnown RBP12.53□□□□□ -0.4
UBR1-206ENST00000566493 SHC2P98077 582 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 ZNF252P-AS1Q0IIN9 211 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 PNOCQ13519 176 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 E2F5Q15329 346 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 DCAF17Q5H9S7 520 aaPredicted RBP12.53□□□□□ -0.4
UBR1-206ENST00000566493 Q6ZNB5 142 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 TOGARAM2Q6ZUX3 1019 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 RABEPKQ7Z6M1 372 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 DEFB119Q8N690 84 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 ANKRD52Q8NB46 1076 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 SLC4A11Q8NBS3 891 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 ACOX2Q99424 681 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 GDPD2Q9HCC8 539 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 TMEM74BQ9NUR3 256 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 PLK2Q9NYY3 685 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 PILRBQ9UKJ0 227 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 HCN2Q9UL51 889 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 STRIP2Q9ULQ0 834 aa12.53□□□□□ -0.4
UBR1-206ENST00000566493 GFRA2O00451 464 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 GIPC1O14908 333 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 NDUFS2O75306 463 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 KRT37O76014 449 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 SMC2O95347 1197 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 CISD3P0C7P0 127 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 ENGP17813 658 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 NDUFV2P19404 249 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 CSRP1P21291 193 aaKnown RBP12.52□□□□□ -0.41
UBR1-206ENST00000566493 ITPKAP23677 461 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 CORO1AP31146 461 aaKnown RBP12.52□□□□□ -0.41
UBR1-206ENST00000566493 PRCPP42785 496 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 TKTL1P51854 596 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 YWHAGP61981 247 aaKnown RBP eCLIP12.52□□□□□ -0.41
UBR1-206ENST00000566493 STARD3Q14849 445 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 DUOXA1Q1HG43 343 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 ZNF658Q5TYW1 1059 aaPredicted RBP12.52□□□□□ -0.41
UBR1-206ENST00000566493 ARHGAP17Q68EM7 881 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 SLC23A3Q6PIS1 610 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 PIGZQ86VD9 579 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 HDDC3Q8N4P3 179 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 UCMAQ8WVF2 138 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 TATDN2Q93075 761 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 MARVELD3Q96A59 401 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 ERLEC1Q96DZ1 483 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 ARID3AQ99856 593 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 GABRG3Q99928 467 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 SLC32A1Q9H598 525 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 CACNA2D2Q9NY47 1150 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 MARCH2Q9P0N8 246 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 HESX1Q9UBX0 185 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 HOOK1Q9UJC3 728 aaKnown RBP12.52□□□□□ -0.41
UBR1-206ENST00000566493 SLC6A14Q9UN76 642 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 CYP8B1Q9UNU6 501 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 RAD54BQ9Y620 910 aa12.52□□□□□ -0.41
UBR1-206ENST00000566493 ATXN2Q99700 1313 aaKnown RBP12.52□□□□□ -0.41
UBR1-206ENST00000566493 IGHV1OR15-9A0A0B4J2B8 117 aa12.51□□□□□ -0.41
UBR1-206ENST00000566493 SLC12A8A0AV02 714 aa12.51□□□□□ -0.41
UBR1-206ENST00000566493 NPC1O15118 1278 aa12.51□□□□□ -0.41
UBR1-206ENST00000566493 SLC16A3O15427 465 aaKnown RBP12.51□□□□□ -0.41
UBR1-206ENST00000566493 ZBED1O96006 694 aa12.51□□□□□ -0.41
UBR1-206ENST00000566493 KLKB1P03952 638 aa12.51□□□□□ -0.41
UBR1-206ENST00000566493 FKBP3Q00688 224 aaKnown RBP12.51□□□□□ -0.41
UBR1-206ENST00000566493 GFPT1Q06210 699 aaPredicted RBP12.51□□□□□ -0.41
UBR1-206ENST00000566493 ZNF33AQ06730 810 aa12.51□□□□□ -0.41
UBR1-206ENST00000566493 FOXC1Q12948 553 aa12.51□□□□□ -0.41
UBR1-206ENST00000566493 GOLGA7BQ2TAP0 167 aa12.51□□□□□ -0.41
UBR1-206ENST00000566493 SGO2Q562F6 1265 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms