RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 TTC34A8MYJ7 566 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 PRAMEF2O60811 474 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 CAMTA2O94983 1202 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 TMIGD3P0DMS9 266 aaPredicted RBP2.79□□□□□ -1.96
SMG1-212ENST00000566328 KITP10721 976 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 NCLP19338 710 aaKnown RBP2.79□□□□□ -1.96
SMG1-212ENST00000566328 STK3Q13188 491 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 ARHGEF7Q14155 803 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 CLCA4Q14CN2 919 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 CNGA3Q16281 694 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 NADSYN1Q6IA69 706 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 FBXL22Q6P050 247 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 MZT2AQ6P582 158 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 ZDHHC24Q6UX98 284 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 KCTD20Q7Z5Y7 419 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 C11orf44Q8N8P7 122 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 DIS3LQ8TF46 1054 aaKnown RBP2.79□□□□□ -1.96
SMG1-212ENST00000566328 KAT2BQ92831 832 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 HIST1H2AAQ96QV6 131 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 HTATIP2Q9BUP3 242 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 AGO4Q9HCK5 861 aaKnown RBP2.79□□□□□ -1.96
SMG1-212ENST00000566328 THSD1Q9NS62 852 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 PLK2Q9NYY3 685 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 IPO11Q9UI26 975 aaKnown RBP2.79□□□□□ -1.96
SMG1-212ENST00000566328 RIMKLBQ9ULI2 386 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 ICAM5Q9UMF0 924 aa2.79□□□□□ -1.96
SMG1-212ENST00000566328 HEMK1Q9Y5R4 338 aaPredicted RBP2.79□□□□□ -1.96
SMG1-212ENST00000566328 H7C4K7 107 aa2.78□□□□□ -1.96
SMG1-212ENST00000566328 PYCARD-AS1I3L0S3 204 aa2.78□□□□□ -1.96
SMG1-212ENST00000566328 TNFRSF13BO14836 293 aaPredicted RBP2.78□□□□□ -1.96
SMG1-212ENST00000566328 UGDHO60701 494 aa2.78□□□□□ -1.96
SMG1-212ENST00000566328 INMTO95050 263 aa2.78□□□□□ -1.96
SMG1-212ENST00000566328 SLC3A2P08195 630 aaKnown RBP2.78□□□□□ -1.96
SMG1-212ENST00000566328 TMEM225BP0DP42 221 aa2.78□□□□□ -1.96
SMG1-212ENST00000566328 GALNSP34059 522 aa2.78□□□□□ -1.96
SMG1-212ENST00000566328 ITGA8P53708 1063 aa2.78□□□□□ -1.96
SMG1-212ENST00000566328 SLC29A2Q14542 456 aa2.78□□□□□ -1.96
SMG1-212ENST00000566328 OTUD3Q5T2D3 398 aaPredicted RBP2.78□□□□□ -1.96
SMG1-212ENST00000566328 P3H2Q8IVL5 708 aa2.78□□□□□ -1.96
SMG1-212ENST00000566328 METTL25Q8N6Q8 603 aa2.78□□□□□ -1.96
SMG1-212ENST00000566328 OR56A3Q8NH54 315 aa2.78□□□□□ -1.96
SMG1-212ENST00000566328 TMEM255BQ8WV15 326 aa2.78□□□□□ -1.96
SMG1-212ENST00000566328 OIT3Q8WWZ8 545 aa2.78□□□□□ -1.96
SMG1-212ENST00000566328 CENPIQ92674 756 aaPredicted RBP2.78□□□□□ -1.96
SMG1-212ENST00000566328 MSI2Q96DH6 328 aaKnown RBP2.78□□□□□ -1.96
SMG1-212ENST00000566328 RNF26Q9BY78 433 aaPredicted RBP2.78□□□□□ -1.96
SMG1-212ENST00000566328 C6orf106Q9H6K1 298 aaPredicted RBP2.78□□□□□ -1.96
SMG1-212ENST00000566328 TASP1Q9H6P5 420 aa2.78□□□□□ -1.96
SMG1-212ENST00000566328 ZMAT3Q9HA38 289 aaKnown RBP2.78□□□□□ -1.96
SMG1-212ENST00000566328 MOV10Q9HCE1 1003 aaKnown RBP2.78□□□□□ -1.96
SMG1-212ENST00000566328 DNAJB11Q9UBS4 358 aa2.78□□□□□ -1.96
SMG1-212ENST00000566328 HDAC9Q9UKV0 1011 aa2.78□□□□□ -1.96
SMG1-212ENST00000566328 KIR2DS5A0A0G2JLQ3 304 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 A0A1W2PPC1 479 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 RPS10-NUDT3A0A1W2PQS6 291 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 H0YGN5 161 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 KIR2DS3K7RE56 304 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 CA12O43570 354 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 LDB3O75112 727 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 ATG13O75143 517 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 UBXN7O94888 489 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 PAPSS2O95340 614 aaPredicted RBP2.77□□□□□ -1.97
SMG1-212ENST00000566328 HOXC6P09630 235 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 CT47B1P0C2W7 299 aaPredicted RBP2.77□□□□□ -1.97
SMG1-212ENST00000566328 PF4V1P10720 104 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 ST6GAL1P15907 406 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 TPH1P17752 444 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 RBL1P28749 1068 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 SLC7A1P30825 629 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 CPT1AP50416 773 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 EVA1CP58658 441 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 DSCR9P59020 149 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 KRTAP10-5P60370 271 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 DNASE1L3Q13609 305 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 SLC4A8Q2Y0W8 1093 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 ANO6Q4KMQ2 910 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 WASHC2DQ5SRD0 308 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 CLEC9AQ6UXN8 241 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 USP49Q70CQ1 688 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 SRGAP1Q7Z6B7 1085 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 TFAP2DQ7Z6R9 452 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 ZNF329Q86UD4 541 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 MORC1Q86VD1 984 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 TMPRSS12Q86WS5 348 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 MICU3Q86XE3 530 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 YAF2Q8IY57 180 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.77□□□□□ -1.97
SMG1-212ENST00000566328 IPCEF1Q8WWN9 437 aaPredicted RBP2.77□□□□□ -1.97
SMG1-212ENST00000566328 ZDHHC12Q96GR4 267 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 SENP7Q9BQF6 1050 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 PIMREGQ9BSJ6 248 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 TTLL2Q9BWV7 592 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 STK31Q9BXU1 1019 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 SEZ6LQ9BYH1 1024 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 MLXIPLQ9NP71 852 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 GABBR1Q9UBS5 961 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 SLC27A6Q9Y2P4 619 aa2.77□□□□□ -1.97
SMG1-212ENST00000566328 A0A0G2JK05 382 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 TRIM43BA6NCK2 446 aa2.76□□□□□ -1.97
SMG1-212ENST00000566328 AGPSO00116 658 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms